The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)

The perennial herbal medicine species Aconitum tschangbaischanense, is endemic to Changhai Mountain, Jilin province. In this study, we attempted to uncover the complete chloroplast (cp) genome of A. tschangbaischanense based on sequencing data using the Illumina sequencing technology. As per the res...

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Main Authors: Xuelian Liu, Junyi Zhu, Mingge Jiang, Shengchao Guan, Liqiu Zhang, Haiying Zhao
Format: Article
Language:English
Published: Taylor & Francis Group 2023-06-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
Online Access:http://dx.doi.org/10.1080/23802359.2023.2220435
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author Xuelian Liu
Junyi Zhu
Mingge Jiang
Shengchao Guan
Liqiu Zhang
Haiying Zhao
author_facet Xuelian Liu
Junyi Zhu
Mingge Jiang
Shengchao Guan
Liqiu Zhang
Haiying Zhao
author_sort Xuelian Liu
collection DOAJ
description The perennial herbal medicine species Aconitum tschangbaischanense, is endemic to Changhai Mountain, Jilin province. In this study, we attempted to uncover the complete chloroplast (cp) genome of A. tschangbaischanense based on sequencing data using the Illumina sequencing technology. As per the results: (1) the length of its complete cp genome is 155,881 bp with a typical tetrad structure; (2) the structure of its cp genome contains large single-copy and small single-copy (LSC and SSC) regions of 86,351 and 16,9444 bp, respectively, isolated by two inverted repeat regions (IRs) of 26,293 bp; (3) we annotated a total 131 genes, consisting of 86 protein-coding genes, eight rRNA genes, and 37 tRNA genes. According to the maximum-likelihood phylogenetic tree based on complete cp genomes, A. tschangbaischanense, showed close association with A. carmichaelii, which belongs to clade I. Finally, this study provides the characteristics of the cp genome of A. tschangbaischanense, and its phylogenetic position.
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spelling doaj.art-0c29b514ebf547a9a88a25f9e053d20f2023-11-03T14:44:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-06-018665866210.1080/23802359.2023.22204352220435The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)Xuelian Liu0Junyi Zhu1Mingge Jiang2Shengchao Guan3Liqiu Zhang4Haiying Zhao5College of Life Science, Tonghua Normal UniversityCollege of Life Science, Tonghua Normal UniversityCollege of Life Science, Tonghua Normal UniversityCollege of Life Science, Tonghua Normal UniversityCollege of Medical, Tonghua Normal UniversityCollege of History and Geography, Tonghua Normal UniversityThe perennial herbal medicine species Aconitum tschangbaischanense, is endemic to Changhai Mountain, Jilin province. In this study, we attempted to uncover the complete chloroplast (cp) genome of A. tschangbaischanense based on sequencing data using the Illumina sequencing technology. As per the results: (1) the length of its complete cp genome is 155,881 bp with a typical tetrad structure; (2) the structure of its cp genome contains large single-copy and small single-copy (LSC and SSC) regions of 86,351 and 16,9444 bp, respectively, isolated by two inverted repeat regions (IRs) of 26,293 bp; (3) we annotated a total 131 genes, consisting of 86 protein-coding genes, eight rRNA genes, and 37 tRNA genes. According to the maximum-likelihood phylogenetic tree based on complete cp genomes, A. tschangbaischanense, showed close association with A. carmichaelii, which belongs to clade I. Finally, this study provides the characteristics of the cp genome of A. tschangbaischanense, and its phylogenetic position.http://dx.doi.org/10.1080/23802359.2023.2220435aconitum tschangbaischanense s. h. li & y. h. huang, 1975chloroplast genomeendangered species
spellingShingle Xuelian Liu
Junyi Zhu
Mingge Jiang
Shengchao Guan
Liqiu Zhang
Haiying Zhao
The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
Mitochondrial DNA. Part B. Resources
aconitum tschangbaischanense s. h. li & y. h. huang, 1975
chloroplast genome
endangered species
title The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
title_full The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
title_fullStr The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
title_full_unstemmed The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
title_short The complete chloroplast genome sequence of Aconitum tschangbaischanense (Ranunculaceae)
title_sort complete chloroplast genome sequence of aconitum tschangbaischanense ranunculaceae
topic aconitum tschangbaischanense s. h. li & y. h. huang, 1975
chloroplast genome
endangered species
url http://dx.doi.org/10.1080/23802359.2023.2220435
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