Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine

Ebolavirus Disease (EVD) is a severe haemorrhagic fever that occurs in epidemic outbreaks, with a high fatality rate and no specific therapies available. rVSVΔG-ZEBOV-GP (Ervebo<sup>®</sup>), a live-attenuated recombinant vesicular stomatitis virus vector expressing the glycoprotein G of...

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Main Authors: Francesco Santoro, Alessia Donato, Simone Lucchesi, Sara Sorgi, Alice Gerlini, Marielle C. Haks, Tom H. M. Ottenhoff, Patricia Gonzalez-Dias, VSV-EBOVAC Consortium, VSV-EBOPLUS Consortium, Helder I. Nakaya, Angela Huttner, Claire-Anne Siegrist, Donata Medaglini, Gianni Pozzi
Format: Article
Language:English
Published: MDPI AG 2021-01-01
Series:Vaccines
Subjects:
Online Access:https://www.mdpi.com/2076-393X/9/2/67
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author Francesco Santoro
Alessia Donato
Simone Lucchesi
Sara Sorgi
Alice Gerlini
Marielle C. Haks
Tom H. M. Ottenhoff
Patricia Gonzalez-Dias
VSV-EBOVAC Consortium
VSV-EBOPLUS Consortium
Helder I. Nakaya
Angela Huttner
Claire-Anne Siegrist
Donata Medaglini
Gianni Pozzi
author_facet Francesco Santoro
Alessia Donato
Simone Lucchesi
Sara Sorgi
Alice Gerlini
Marielle C. Haks
Tom H. M. Ottenhoff
Patricia Gonzalez-Dias
VSV-EBOVAC Consortium
VSV-EBOPLUS Consortium
Helder I. Nakaya
Angela Huttner
Claire-Anne Siegrist
Donata Medaglini
Gianni Pozzi
author_sort Francesco Santoro
collection DOAJ
description Ebolavirus Disease (EVD) is a severe haemorrhagic fever that occurs in epidemic outbreaks, with a high fatality rate and no specific therapies available. rVSVΔG-ZEBOV-GP (Ervebo<sup>®</sup>), a live-attenuated recombinant vesicular stomatitis virus vector expressing the glycoprotein G of Zaire Ebolavirus, is the first vaccine approved for prevention of EVD. Both innate and adaptive responses are deemed to be involved in vaccine-induced protection, yet the mechanisms are not fully elucidated. A global transcriptomic approach was used to profile the blood host-response in 51 healthy volunteers enrolled in a phase 1/2 clinical trial. Signatures of the host responses were investigated assessing the enrichment in differentially expressed genes (DEGs) of specific “blood transcription modules” (BTM). Comparison of gene-expression levels showed that vaccination produces a peak of 5469 DEGs at day one, representing 38.6% of the expressed genes. Out of 346 BTMs, 144 were significantly affected by vaccination. Innate immunity pathways were induced from day 1 to day 14. At days 2 and 3, neutrophil modules were downregulated and complement-related modules upregulated. T-cell and cell-cycle associated modules were upregulated at days 7 and 14, while at day 28, no modules remained activated. At day 14, a direct correlation was observed between ZEBOV glycoprotein-specific antibody titres and activation of seven BTMs, including two related to B-cell activation and B cell receptor signalling. Transcriptomic analysis identified an rVSVΔG-ZEBOV-GP-induced signature and demonstrated a direct correlation of blood transcriptomic changes with ZEBOV glycoprotein-specific antibody titres.
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spelling doaj.art-0cc37b3556264c92acdea5514faf43ff2023-12-03T13:55:46ZengMDPI AGVaccines2076-393X2021-01-01926710.3390/vaccines9020067Human Transcriptomic Response to the VSV-Vectored Ebola VaccineFrancesco Santoro0Alessia Donato1Simone Lucchesi2Sara Sorgi3Alice Gerlini4Marielle C. Haks5Tom H. M. Ottenhoff6Patricia Gonzalez-Dias7VSV-EBOVAC ConsortiumVSV-EBOPLUS ConsortiumHelder I. Nakaya8Angela Huttner9Claire-Anne Siegrist10Donata Medaglini11Gianni Pozzi12Laboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyLaboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyLaboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyLaboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyMicrobiotec srl, 53100 Siena, ItalyDepartment of Infectious Diseases, Leiden University Medical Center, 2333 Leiden, The NetherlandsDepartment of Infectious Diseases, Leiden University Medical Center, 2333 Leiden, The NetherlandsDepartment of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo 05508-020, BrazilDepartment of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo 05508-020, BrazilDepartment of Pathology and Immunology, Faculty of Medicine, University of Geneva, 1211 Geneva, SwitzerlandDepartment of Pathology and Immunology, Faculty of Medicine, University of Geneva, 1211 Geneva, SwitzerlandLaboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyLaboratory of Molecular Microbiology and Biotechnology (LAMMB), Department of Medical Biotechnologies, University of Siena, 53100 Siena, ItalyEbolavirus Disease (EVD) is a severe haemorrhagic fever that occurs in epidemic outbreaks, with a high fatality rate and no specific therapies available. rVSVΔG-ZEBOV-GP (Ervebo<sup>®</sup>), a live-attenuated recombinant vesicular stomatitis virus vector expressing the glycoprotein G of Zaire Ebolavirus, is the first vaccine approved for prevention of EVD. Both innate and adaptive responses are deemed to be involved in vaccine-induced protection, yet the mechanisms are not fully elucidated. A global transcriptomic approach was used to profile the blood host-response in 51 healthy volunteers enrolled in a phase 1/2 clinical trial. Signatures of the host responses were investigated assessing the enrichment in differentially expressed genes (DEGs) of specific “blood transcription modules” (BTM). Comparison of gene-expression levels showed that vaccination produces a peak of 5469 DEGs at day one, representing 38.6% of the expressed genes. Out of 346 BTMs, 144 were significantly affected by vaccination. Innate immunity pathways were induced from day 1 to day 14. At days 2 and 3, neutrophil modules were downregulated and complement-related modules upregulated. T-cell and cell-cycle associated modules were upregulated at days 7 and 14, while at day 28, no modules remained activated. At day 14, a direct correlation was observed between ZEBOV glycoprotein-specific antibody titres and activation of seven BTMs, including two related to B-cell activation and B cell receptor signalling. Transcriptomic analysis identified an rVSVΔG-ZEBOV-GP-induced signature and demonstrated a direct correlation of blood transcriptomic changes with ZEBOV glycoprotein-specific antibody titres.https://www.mdpi.com/2076-393X/9/2/67Ebolavirus Diseasetranscriptomicsrecombinant VSVVSV-ZEBOVvaccinelive viral vector
spellingShingle Francesco Santoro
Alessia Donato
Simone Lucchesi
Sara Sorgi
Alice Gerlini
Marielle C. Haks
Tom H. M. Ottenhoff
Patricia Gonzalez-Dias
VSV-EBOVAC Consortium
VSV-EBOPLUS Consortium
Helder I. Nakaya
Angela Huttner
Claire-Anne Siegrist
Donata Medaglini
Gianni Pozzi
Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
Vaccines
Ebolavirus Disease
transcriptomics
recombinant VSV
VSV-ZEBOV
vaccine
live viral vector
title Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
title_full Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
title_fullStr Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
title_full_unstemmed Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
title_short Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine
title_sort human transcriptomic response to the vsv vectored ebola vaccine
topic Ebolavirus Disease
transcriptomics
recombinant VSV
VSV-ZEBOV
vaccine
live viral vector
url https://www.mdpi.com/2076-393X/9/2/67
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