Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)
Bambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in siz...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1793699 |
| _version_ | 1797639121321066496 |
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| author | Ying Zheng Dan Hou Juan Zhuo Renhong Zheng Yong Wang Benxiang Li Xuejun Yu Xinchun Lin |
| author_facet | Ying Zheng Dan Hou Juan Zhuo Renhong Zheng Yong Wang Benxiang Li Xuejun Yu Xinchun Lin |
| author_sort | Ying Zheng |
| collection | DOAJ |
| description | Bambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in size with a pair of inverted repeat (IR) regions of 43,587 bp, which separates a large single-copy (LSC) region of 83,036 bp and a small single-copy (SSC) region of 12,875 bp. Plastid genome contains 132 genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 30 cp genomes indicates that B. rigida is closely related to Bambusa ventricosa in Bambuseae. |
| first_indexed | 2024-03-11T13:13:17Z |
| format | Article |
| id | doaj.art-0e3d836479de4b7badac8e838a7cbe79 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:17Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-0e3d836479de4b7badac8e838a7cbe792023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532972297310.1080/23802359.2020.17936991793699Complete chloroplast genome sequence of Bambusa rigida (Bambuseae)Ying Zheng0Dan Hou1Juan Zhuo2Renhong Zheng3Yong Wang4Benxiang Li5Xuejun Yu6Xinchun Lin7State Key Laboratory of Subtropical Silviculture, Zhejiang A&F UniversityState Key Laboratory of Subtropical Silviculture, Zhejiang A&F UniversityState Key Laboratory of Subtropical Silviculture, Zhejiang A&F UniversityYibin Forestry and Bamboo Industry Research InstituteYibin Forestry and Bamboo Industry Research InstituteSichuan Changning Century Bamboo GardenState Key Laboratory of Subtropical Silviculture, Zhejiang A&F UniversityState Key Laboratory of Subtropical Silviculture, Zhejiang A&F UniversityBambusa rigida is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of B. rigida using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in size with a pair of inverted repeat (IR) regions of 43,587 bp, which separates a large single-copy (LSC) region of 83,036 bp and a small single-copy (SSC) region of 12,875 bp. Plastid genome contains 132 genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 30 cp genomes indicates that B. rigida is closely related to Bambusa ventricosa in Bambuseae.http://dx.doi.org/10.1080/23802359.2020.1793699bambusa rigidachloroplast genomephylogeny |
| spellingShingle | Ying Zheng Dan Hou Juan Zhuo Renhong Zheng Yong Wang Benxiang Li Xuejun Yu Xinchun Lin Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) Mitochondrial DNA. Part B. Resources bambusa rigida chloroplast genome phylogeny |
| title | Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) |
| title_full | Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) |
| title_fullStr | Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) |
| title_full_unstemmed | Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) |
| title_short | Complete chloroplast genome sequence of Bambusa rigida (Bambuseae) |
| title_sort | complete chloroplast genome sequence of bambusa rigida bambuseae |
| topic | bambusa rigida chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2020.1793699 |
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