Characterization of the complete chloroplast genome of Actinidia Melanandra (Actinidiaceae)

Characterization of the complete chloroplast genome of Actinidia Melanandra (Actinidiaceae)

The whole chloroplast (cp) genome sequence of Actinidia melanandra has been characterized from Illumina pair-end sequencing. The complete cp genome was 156,124 bp in length, containing a large single-copy region (LSC) of 88,006 bp and a small single-copy region (SSC) of 20,332 bp, which were separat...

Full description

Bibliographic Details
Main Authors: Yuemei Zhao, Zhixin Zhao, Weili Tang, Xiaoling Li, Yongping Zhao, Baoyun Gao, Xiaodan Xie, Xiaobin Zhang
Format: Article
Language:English
Published: Taylor & Francis Group 2019-07-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
actinidia melanandra
chloroplast
illumina sequencing
phylogenetic analysis
Online Access:http://dx.doi.org/10.1080/23802359.2019.1623129
Description
Summary:The whole chloroplast (cp) genome sequence of Actinidia melanandra has been characterized from Illumina pair-end sequencing. The complete cp genome was 156,124 bp in length, containing a large single-copy region (LSC) of 88,006 bp and a small single-copy region (SSC) of 20,332 bp, which were separated by a pair of inverted repeat (IR) regions of 23,893 bp. The genome contained 131 genes, including 84 protein-coding genes, 39 tRNA genes, and 8 ribosomal RNA genes (4 rRNA species). Most genes occur as a single copy, while 17 gene species are duplicated. Phylogenetic analysis revealed that A. melanandra is closely related to the species of A. deliciosa and A. chinensis.
ISSN:2380-2359

Similar Items