GRAPE: genomic relatedness detection pipeline [version 2; peer review: 2 approved]

GRAPE: genomic relatedness detection pipeline [version 2; peer review: 2 approved]

Classifying the degree of relatedness between pairs of individuals has both scientific and commercial applications. As an example, genome-wide association studies (GWAS) may suffer from high rates of false positive results due to unrecognized population structure. This problem becomes especially rel...

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Bibliographic Details
Main Authors: Pavel Nikonorov, Dmitry Kolobkov, Hui Wang, Ruslan Vakhitov, Vitalina Chamberlain-Evans, Dmitriy Osipenko, Mikhail Kosaretskiy, Egor Kosaretskiy, Alexander Tischenko, Alexander Medvedev, Andrew Ponomarev, Mikhail Lebedev
Format: Article
Language:English
Published: F1000 Research Ltd 2023-04-01
Series:F1000Research
Subjects:
kinship and relationship estimation
identity-by-descent
snakemake workflow
bioinformatics pipeline
phasing and imputation
sequencing data
eng
Online Access:https://f1000research.com/articles/11-589/v2

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