Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china
Porcine astrovirus (PAstV) is a frequently detected virus in pigs suffering from diarrhea worldwide. Here, we report the first identification and complete genome sequence of astrovirus in wild boar (Sus scrofa) in Jiangxi, China. The complete genome sequence of a representative astrovirus, WBAstV/CH...
| Автори: | , , , , , , , , , |
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| Формат: | Стаття |
| Мова: | English |
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Kafkas University, Faculty of Veterinary Medicine
2018-09-01
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| Серія: | Kafkas Universitesi Veteriner Fakültesi Dergisi |
| Предмети: | |
| Онлайн доступ: | https://vetdergikafkas.org/pdf.php?id=2420 |
| _version_ | 1827922153957228544 |
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| author | Fan-fan ZHANG Yu-xin TANG Yu YE Nannan GUO Min ZHANG Hao LI Dan LEI Qiong WU Dong-yan HUANG De-ping SONG |
| author_facet | Fan-fan ZHANG Yu-xin TANG Yu YE Nannan GUO Min ZHANG Hao LI Dan LEI Qiong WU Dong-yan HUANG De-ping SONG |
| author_sort | Fan-fan ZHANG |
| collection | DOAJ |
| description | Porcine astrovirus (PAstV) is a frequently detected virus in pigs suffering from diarrhea worldwide. Here, we report the first identification and complete genome sequence of astrovirus in wild boar (Sus scrofa) in Jiangxi, China. The complete genome sequence of a representative astrovirus, WBAstV/CH/2015, was amplified and determined. Sequence homology analysis showed that WBAstV/CH/2015 had 40.8% to 79.7% homology with PAstVs worlwide, and shared the highest homology (79.7%) with another wild boar astrovirus (WBAstV) strain WBAstV-1/2011/HUN from Hungary. Phylogenetic analysis showed that WBAstV/CH/2015 was closely related to WBAstV-1/2011/HUN and located in the cluster of PAstV 4. |
| first_indexed | 2024-03-13T04:37:57Z |
| format | Article |
| id | doaj.art-10cdf9c1fbee475ab6104d108ea7b51a |
| institution | Directory Open Access Journal |
| issn | 1309-2251 |
| language | English |
| last_indexed | 2024-03-13T04:37:57Z |
| publishDate | 2018-09-01 |
| publisher | Kafkas University, Faculty of Veterinary Medicine |
| record_format | Article |
| series | Kafkas Universitesi Veteriner Fakültesi Dergisi |
| spelling | doaj.art-10cdf9c1fbee475ab6104d108ea7b51a2023-06-19T06:41:19ZengKafkas University, Faculty of Veterinary MedicineKafkas Universitesi Veteriner Fakültesi Dergisi1309-22512018-09-0124689990310.9775/kvfd.2018.201392420Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in chinaFan-fan ZHANG0Yu-xin TANG1Yu YE2Nannan GUO3Min ZHANG4Hao LI5Dan LEI6Qiong WU7Dong-yan HUANG8De-ping SONG9Key Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAKey Laboratory for Animal Health of Jiangxi Province, 330045, Nanchang, Jiangxi, CHINAPorcine astrovirus (PAstV) is a frequently detected virus in pigs suffering from diarrhea worldwide. Here, we report the first identification and complete genome sequence of astrovirus in wild boar (Sus scrofa) in Jiangxi, China. The complete genome sequence of a representative astrovirus, WBAstV/CH/2015, was amplified and determined. Sequence homology analysis showed that WBAstV/CH/2015 had 40.8% to 79.7% homology with PAstVs worlwide, and shared the highest homology (79.7%) with another wild boar astrovirus (WBAstV) strain WBAstV-1/2011/HUN from Hungary. Phylogenetic analysis showed that WBAstV/CH/2015 was closely related to WBAstV-1/2011/HUN and located in the cluster of PAstV 4.https://vetdergikafkas.org/pdf.php?id=2420porcine astrovirus (pastv)diarrheawild boar (sus scrofa)genomephylogenetic analysis |
| spellingShingle | Fan-fan ZHANG Yu-xin TANG Yu YE Nannan GUO Min ZHANG Hao LI Dan LEI Qiong WU Dong-yan HUANG De-ping SONG Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china Kafkas Universitesi Veteriner Fakültesi Dergisi porcine astrovirus (pastv) diarrhea wild boar (sus scrofa) genome phylogenetic analysis |
| title | Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china |
| title_full | Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china |
| title_fullStr | Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china |
| title_full_unstemmed | Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china |
| title_short | Identification and genetic characterization of astrovirus in wild boar (sus scrofa) in china |
| title_sort | identification and genetic characterization of astrovirus in wild boar sus scrofa in china |
| topic | porcine astrovirus (pastv) diarrhea wild boar (sus scrofa) genome phylogenetic analysis |
| url | https://vetdergikafkas.org/pdf.php?id=2420 |
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