Knotting and unknotting proteins in the chaperonin cage: Effects of the excluded volume.
Molecular dynamics simulations are used to explore the effects of chaperonin-like cages on knotted proteins with very low sequence similarity, different depths of a knot but with a similar fold, and the same type of topology. The investigated proteins are VirC2, DndE and MJ0366 with two depths of a...
Main Authors: | Szymon Niewieczerzal, Joanna I Sulkowska |
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Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2017-01-01
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Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC5425179?pdf=render |
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