deltaRpkm: an R package for a rapid detection of differential gene presence between related bacterial genomes
Abstract Background Comparative genomics has seen the development of many software performing the clustering, polymorphism and gene content analysis of genomes at different phylogenetic levels (isolates, species). These tools rely on de novo assembly and/or multiple alignments that can be computatio...
Main Authors: | Hatice Akarsu, Lisandra Aguilar-Bultet, Laurent Falquet |
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Format: | Article |
Language: | English |
Published: |
BMC
2019-12-01
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Series: | BMC Bioinformatics |
Subjects: | |
Online Access: | https://doi.org/10.1186/s12859-019-3234-2 |
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