Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts

Antimicrobial resistance has been described in all ecosystems, including wildlife. Here we investigated the presence of methicillin-resistant and susceptible staphylococci in both colony-born and wild vervet monkeys (<i>Chlorocebus sabaeus</i>). Through selective isolation, PCR, MALDI-TO...

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Main Authors: Andreas Hoefer, Filip Boyen, Amy Beierschmitt, Arshnee Moodley, Marilyn C. Roberts, Patrick Butaye
Format: Article
Language:English
Published: MDPI AG 2021-03-01
Series:Antibiotics
Subjects:
Online Access:https://www.mdpi.com/2079-6382/10/3/290
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author Andreas Hoefer
Filip Boyen
Amy Beierschmitt
Arshnee Moodley
Marilyn C. Roberts
Patrick Butaye
author_facet Andreas Hoefer
Filip Boyen
Amy Beierschmitt
Arshnee Moodley
Marilyn C. Roberts
Patrick Butaye
author_sort Andreas Hoefer
collection DOAJ
description Antimicrobial resistance has been described in all ecosystems, including wildlife. Here we investigated the presence of methicillin-resistant and susceptible staphylococci in both colony-born and wild vervet monkeys (<i>Chlorocebus sabaeus</i>). Through selective isolation, PCR, MALDI-TOF, and whole-genome sequencing, methicillin-resistant and susceptible <i>Staphylococcus</i> spp. isolated from vervet monkeys were characterized. We obtained putatively methicillin-resistant staphylococci from 29 of the 34 nasal samples collected. Strains were identified by MALDI-TOF analysis. <i>Staphylococcus cohnii</i> (<i>n</i> = 15) was the most commonly isolated species, while nine other species were isolated one or two times. PCR analysis indicated that eight [28%] strains were <i>mecA</i> positive. The whole-genome sequencing [WGS] included eight methicillin-resistant strains (<i>S. epidermidis</i> (<i>n</i> = 2), <i>S. cohnii</i> (<i>n</i> = 3), <i>S. arlettae</i> (<i>n</i> = 2) and <i>S. hominis</i> (<i>n</i> = 1)), nine additional <i>S. cohnii</i> strains and two strains that could not be identified by MALDI-TOF, but genetically characterized as one <i>S. cohnii</i> and one <i>S. warneri</i>. Different resistance genes carried by different mobile genetic elements, mainly <i>blaZ</i> (<i>n</i> = 10) and <i>tet</i>(K) (<i>n</i> = 5) were found, while <i>msr</i>(A), <i>cat</i>, <i>fosB</i>, <i>dfrG</i>, <i>erm</i>(C), <i>mph</i>(C) and <i>str</i> were identified in one to three strains. Phylogenetic analysis of the <i>S. cohnii</i> strains based on SNPs indicated four clusters associated with colony born or wild. In addition, one singleton <i>S. cohnii</i> isolated did not form a separate group and clustered within other <i>S. cohnii</i> strains submitted to the NCBI. In this study, we demonstrated the presence of AMR and mobile genetic elements to both colony-born and wild vervet monkeys. We also identified a previously undescribed prevalence of <i>S. cohnii</i> in the nasal flora of these monkeys, which merits further investigation.
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spelling doaj.art-1154acf323ef433886a2324adca4b8762023-11-21T09:57:32ZengMDPI AGAntibiotics2079-63822021-03-0110329010.3390/antibiotics10030290Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint KittsAndreas Hoefer0Filip Boyen1Amy Beierschmitt2Arshnee Moodley3Marilyn C. Roberts4Patrick Butaye5School of Veterinary Medicine, Ross University, West Farm 000265, Saint Kitts and NevisDepartment of Pathology, Bacteriology and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, 9000 Merelbeke, BelgiumSchool of Veterinary Medicine, Ross University, West Farm 000265, Saint Kitts and NevisDepartment of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1165 Copenhagen, DenmarkDepartment of Environmental and Occupational Health, School of Public Health, University of Washington, Seattle, WA 98195, USASchool of Veterinary Medicine, Ross University, West Farm 000265, Saint Kitts and NevisAntimicrobial resistance has been described in all ecosystems, including wildlife. Here we investigated the presence of methicillin-resistant and susceptible staphylococci in both colony-born and wild vervet monkeys (<i>Chlorocebus sabaeus</i>). Through selective isolation, PCR, MALDI-TOF, and whole-genome sequencing, methicillin-resistant and susceptible <i>Staphylococcus</i> spp. isolated from vervet monkeys were characterized. We obtained putatively methicillin-resistant staphylococci from 29 of the 34 nasal samples collected. Strains were identified by MALDI-TOF analysis. <i>Staphylococcus cohnii</i> (<i>n</i> = 15) was the most commonly isolated species, while nine other species were isolated one or two times. PCR analysis indicated that eight [28%] strains were <i>mecA</i> positive. The whole-genome sequencing [WGS] included eight methicillin-resistant strains (<i>S. epidermidis</i> (<i>n</i> = 2), <i>S. cohnii</i> (<i>n</i> = 3), <i>S. arlettae</i> (<i>n</i> = 2) and <i>S. hominis</i> (<i>n</i> = 1)), nine additional <i>S. cohnii</i> strains and two strains that could not be identified by MALDI-TOF, but genetically characterized as one <i>S. cohnii</i> and one <i>S. warneri</i>. Different resistance genes carried by different mobile genetic elements, mainly <i>blaZ</i> (<i>n</i> = 10) and <i>tet</i>(K) (<i>n</i> = 5) were found, while <i>msr</i>(A), <i>cat</i>, <i>fosB</i>, <i>dfrG</i>, <i>erm</i>(C), <i>mph</i>(C) and <i>str</i> were identified in one to three strains. Phylogenetic analysis of the <i>S. cohnii</i> strains based on SNPs indicated four clusters associated with colony born or wild. In addition, one singleton <i>S. cohnii</i> isolated did not form a separate group and clustered within other <i>S. cohnii</i> strains submitted to the NCBI. In this study, we demonstrated the presence of AMR and mobile genetic elements to both colony-born and wild vervet monkeys. We also identified a previously undescribed prevalence of <i>S. cohnii</i> in the nasal flora of these monkeys, which merits further investigation.https://www.mdpi.com/2079-6382/10/3/290methicillin resistance<i>Staphylococcus</i>whole-genome sequencingmonkeyvervet<i>Chlorocebus sabaeus</i>
spellingShingle Andreas Hoefer
Filip Boyen
Amy Beierschmitt
Arshnee Moodley
Marilyn C. Roberts
Patrick Butaye
Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
Antibiotics
methicillin resistance
<i>Staphylococcus</i>
whole-genome sequencing
monkey
vervet
<i>Chlorocebus sabaeus</i>
title Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
title_full Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
title_fullStr Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
title_full_unstemmed Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
title_short Methicillin-Resistant and Methicillin-Susceptible <i>Staphylococcus</i> from Vervet Monkeys (<i>Chlorocebus sabaeus</i>) in Saint Kitts
title_sort methicillin resistant and methicillin susceptible i staphylococcus i from vervet monkeys i chlorocebus sabaeus i in saint kitts
topic methicillin resistance
<i>Staphylococcus</i>
whole-genome sequencing
monkey
vervet
<i>Chlorocebus sabaeus</i>
url https://www.mdpi.com/2079-6382/10/3/290
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