The complete chloroplast genome sequence of Abies chensiensis (Pinaceae)
Abies chensiensis is listed as a threatened species in the Red List and categorized as key protected wild plants in China. Here, we determined the complete chloroplast genome of A. chensiensis using the Illumina MiSeq platform. The genome was 121,795 bp in length, comprising a large single copy (LSC...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1542992 |
| _version_ | 1797640563561857024 |
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| author | Lei Su Peng-Fei Zhao Xiao-Fang Lu Yi-Zhen Shao |
| author_facet | Lei Su Peng-Fei Zhao Xiao-Fang Lu Yi-Zhen Shao |
| author_sort | Lei Su |
| collection | DOAJ |
| description | Abies chensiensis is listed as a threatened species in the Red List and categorized as key protected wild plants in China. Here, we determined the complete chloroplast genome of A. chensiensis using the Illumina MiSeq platform. The genome was 121,795 bp in length, comprising a large single copy (LSC) region of 67,160 bp, a small single copy (SSC) region of 54,107 bp, and two inverted repeat regions (IRa and IRb) of 264 bp each. It was composed of 114 genes, including 68 peptide-encoding genes, 35 transfer RNAs (tRNAs), four ribosomal RNAs (rRNAs), six open reading frames and one pseudogene. Phylogenetic analysis revealed that A. chensiensis was most closely related to A. beshanzuensis, with high bootstrap values. The present research will provide potential genetic resources for further conservation and management strategies. |
| first_indexed | 2024-03-11T13:33:07Z |
| format | Article |
| id | doaj.art-11e00d504f4640c294424d72ab064a02 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:07Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-11e00d504f4640c294424d72ab064a022023-11-02T16:07:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423262326310.1080/23802359.2018.15429921542992The complete chloroplast genome sequence of Abies chensiensis (Pinaceae)Lei Su0Peng-Fei Zhao1Xiao-Fang Lu2Yi-Zhen Shao3Henan UniversityHenan Agriculture UniversityHenan Agriculture UniversityHenan Agriculture UniversityAbies chensiensis is listed as a threatened species in the Red List and categorized as key protected wild plants in China. Here, we determined the complete chloroplast genome of A. chensiensis using the Illumina MiSeq platform. The genome was 121,795 bp in length, comprising a large single copy (LSC) region of 67,160 bp, a small single copy (SSC) region of 54,107 bp, and two inverted repeat regions (IRa and IRb) of 264 bp each. It was composed of 114 genes, including 68 peptide-encoding genes, 35 transfer RNAs (tRNAs), four ribosomal RNAs (rRNAs), six open reading frames and one pseudogene. Phylogenetic analysis revealed that A. chensiensis was most closely related to A. beshanzuensis, with high bootstrap values. The present research will provide potential genetic resources for further conservation and management strategies.http://dx.doi.org/10.1080/23802359.2018.1542992abies chensiensischloroplast genomethreatenedphylogenetic |
| spellingShingle | Lei Su Peng-Fei Zhao Xiao-Fang Lu Yi-Zhen Shao The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) Mitochondrial DNA. Part B. Resources abies chensiensis chloroplast genome threatened phylogenetic |
| title | The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) |
| title_full | The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) |
| title_fullStr | The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) |
| title_short | The complete chloroplast genome sequence of Abies chensiensis (Pinaceae) |
| title_sort | complete chloroplast genome sequence of abies chensiensis pinaceae |
| topic | abies chensiensis chloroplast genome threatened phylogenetic |
| url | http://dx.doi.org/10.1080/23802359.2018.1542992 |
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