The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)
Quercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1718029 |
| _version_ | 1797639399342604288 |
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| author | Chunping Xie Dawei Liu Chenghui Nan Yanming Fang Fulong Huang |
| author_facet | Chunping Xie Dawei Liu Chenghui Nan Yanming Fang Fulong Huang |
| author_sort | Chunping Xie |
| collection | DOAJ |
| description | Quercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of a large single-copy region (90,617 bp), small single-copy region (19,035 bp), and two short inverted repeat regions (25,866 bp). We found that the cp genome encodes for 131 genes, including 85 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. The results of the phylogenetic analysis of the complete cp genome sequence illustrated that Q. phillyraeoides is a member of the section Quercus and it is most closely related to Q. tarokoensis. |
| first_indexed | 2024-03-11T13:17:14Z |
| format | Article |
| id | doaj.art-12844f8a66b54436bc80f93cd1590a7e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:14Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-12844f8a66b54436bc80f93cd1590a7e2023-11-03T11:00:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015190490510.1080/23802359.2020.17180291718029The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae)Chunping Xie0Dawei Liu1Chenghui Nan2Yanming Fang3Fulong Huang4Institute of Criminal Science and Technology, Nanjing Forest Police CollegeInstitute of Criminal Science and Technology, Nanjing Forest Police CollegeInstitute of Criminal Science and Technology, Nanjing Forest Police CollegeCollege of Biology and the Environment, Nanjing Forestry UniversityBiodata Biotechnologies Co. LtdQuercus phillyraeoides A. Gray is an evergreen oak species native to East Asia, and it plays a vital role in mountain ecosystems. In this study, we assembled the complete chloroplast genome of Q. phillyraeoides based on sequencing data. The genome was circular and 161,384 bp in length, consisting of a large single-copy region (90,617 bp), small single-copy region (19,035 bp), and two short inverted repeat regions (25,866 bp). We found that the cp genome encodes for 131 genes, including 85 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. The results of the phylogenetic analysis of the complete cp genome sequence illustrated that Q. phillyraeoides is a member of the section Quercus and it is most closely related to Q. tarokoensis.http://dx.doi.org/10.1080/23802359.2020.1718029chloroplast genomequercus phillyraeoidesphylogenetic analysis |
| spellingShingle | Chunping Xie Dawei Liu Chenghui Nan Yanming Fang Fulong Huang The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) Mitochondrial DNA. Part B. Resources chloroplast genome quercus phillyraeoides phylogenetic analysis |
| title | The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) |
| title_full | The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) |
| title_fullStr | The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) |
| title_short | The complete chloroplast genome sequence of Quercus phillyraeoides (Fagaceae) |
| title_sort | complete chloroplast genome sequence of quercus phillyraeoides fagaceae |
| topic | chloroplast genome quercus phillyraeoides phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1718029 |
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