Genome-Wide SNP Data Revealed the Extent of Linkage Disequilibrium, Persistence of Phase and Effective Population Size in Purebred and Crossbred Buffalo Populations

Genome-Wide SNP Data Revealed the Extent of Linkage Disequilibrium, Persistence of Phase and Effective Population Size in Purebred and Crossbred Buffalo Populations

Linkage disequilibrium (LD) is a useful parameter for guiding the accuracy and power of both genome-wide association studies (GWAS) and genomic selection (GS) among different livestock species. The present study evaluated the extent of LD, persistence of phase and effective population size (Ne) for...

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Bibliographic Details
Main Authors: Tingxian Deng, Aixin Liang, Jiajia Liu, Guohua Hua, Tingzhu Ye, Shenhe Liu, Giuseppe Campanile, Graham Plastow, Chunyan Zhang, Zhiquan Wang, Angela Salzano, Bianca Gasparrini, Martino Cassandro, Hasan Riaz, Xianwei Liang, Liguo Yang
Format: Article
Language:English
Published: Frontiers Media S.A. 2019-01-01
Series:Frontiers in Genetics
Subjects:
buffalo
effective population size
linkage disequilibrium
persistence of phase
purebred population
crossbred population
Online Access:https://www.frontiersin.org/article/10.3389/fgene.2018.00688/full

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