Molecular origin of polyglutamine aggregation in neurodegenerative diseases.
Expansion of polyglutamine (polyQ) tracts in proteins results in protein aggregation and is associated with cell death in at least nine neurodegenerative diseases. Disease age of onset is correlated with the polyQ insert length above a critical value of 35-40 glutamines. The aggregation kinetics of...
| Format: | Article |
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| Language: | English |
| Published: |
Public Library of Science (PLoS)
2005-08-01
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| Series: | PLoS Computational Biology |
| Online Access: | http://dx.doi.org/10.1371/journal.pcbi.0010030 |
| _version_ | 1811243045517000704 |
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| collection | DOAJ |
| description | Expansion of polyglutamine (polyQ) tracts in proteins results in protein aggregation and is associated with cell death in at least nine neurodegenerative diseases. Disease age of onset is correlated with the polyQ insert length above a critical value of 35-40 glutamines. The aggregation kinetics of isolated polyQ peptides in vitro also shows a similar critical-length dependence. While recent experimental work has provided considerable insights into polyQ aggregation, the molecular mechanism of aggregation is not well understood. Here, using computer simulations of isolated polyQ peptides, we show that a mechanism of aggregation is the conformational transition in a single polyQ peptide chain from random coil to a parallel beta-helix. This transition occurs selectively in peptides longer than 37 glutamines. In the beta-helices observed in simulations, all residues adopt beta-strand backbone dihedral angles, and the polypeptide chain coils around a central helical axis with 18.5 +/- 2 residues per turn. We also find that mutant polyQ peptides with proline-glycine inserts show formation of antiparallel beta-hairpins in their ground state, in agreement with experiments. The lower stability of mutant beta-helices explains their lower aggregation rates compared to wild type. Our results provide a molecular mechanism for polyQ-mediated aggregation. |
| first_indexed | 2024-04-12T13:59:23Z |
| format | Article |
| id | doaj.art-12f78bbcb816431d8c36ea5bb992805a |
| institution | Directory Open Access Journal |
| issn | 1553-734X 1553-7358 |
| language | English |
| last_indexed | 2024-04-12T13:59:23Z |
| publishDate | 2005-08-01 |
| publisher | Public Library of Science (PLoS) |
| record_format | Article |
| series | PLoS Computational Biology |
| spelling | doaj.art-12f78bbcb816431d8c36ea5bb992805a2022-12-22T03:30:14ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582005-08-0113e30Molecular origin of polyglutamine aggregation in neurodegenerative diseases.Expansion of polyglutamine (polyQ) tracts in proteins results in protein aggregation and is associated with cell death in at least nine neurodegenerative diseases. Disease age of onset is correlated with the polyQ insert length above a critical value of 35-40 glutamines. The aggregation kinetics of isolated polyQ peptides in vitro also shows a similar critical-length dependence. While recent experimental work has provided considerable insights into polyQ aggregation, the molecular mechanism of aggregation is not well understood. Here, using computer simulations of isolated polyQ peptides, we show that a mechanism of aggregation is the conformational transition in a single polyQ peptide chain from random coil to a parallel beta-helix. This transition occurs selectively in peptides longer than 37 glutamines. In the beta-helices observed in simulations, all residues adopt beta-strand backbone dihedral angles, and the polypeptide chain coils around a central helical axis with 18.5 +/- 2 residues per turn. We also find that mutant polyQ peptides with proline-glycine inserts show formation of antiparallel beta-hairpins in their ground state, in agreement with experiments. The lower stability of mutant beta-helices explains their lower aggregation rates compared to wild type. Our results provide a molecular mechanism for polyQ-mediated aggregation.http://dx.doi.org/10.1371/journal.pcbi.0010030 |
| spellingShingle | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. PLoS Computational Biology |
| title | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. |
| title_full | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. |
| title_fullStr | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. |
| title_full_unstemmed | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. |
| title_short | Molecular origin of polyglutamine aggregation in neurodegenerative diseases. |
| title_sort | molecular origin of polyglutamine aggregation in neurodegenerative diseases |
| url | http://dx.doi.org/10.1371/journal.pcbi.0010030 |