A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle

Summary: Skeletal muscle dysfunction or reprogramming due to the effects of the cancer secretome is observed in multiple malignancies. Although mouse models are routinely used to study skeletal muscle defects in cancer, because of species specificity of certain cytokines/chemokines in the secretome,...

Full description

Bibliographic Details
Main Authors: Ruizhong Wang, Brijesh Kumar, Poornima Bhat-Nakshatri, Aditi S. Khatpe, Michael P. Murphy, Kristen E. Wanczyk, Edward Simpson, Duojiao Chen, Hongyu Gao, Yunlong Liu, Emma H. Doud, Amber L. Mosley, Harikrishna Nakshatri
Format: Article
Language:English
Published: Elsevier 2023-04-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004223006181
_version_ 1797847676227682304
author Ruizhong Wang
Brijesh Kumar
Poornima Bhat-Nakshatri
Aditi S. Khatpe
Michael P. Murphy
Kristen E. Wanczyk
Edward Simpson
Duojiao Chen
Hongyu Gao
Yunlong Liu
Emma H. Doud
Amber L. Mosley
Harikrishna Nakshatri
author_facet Ruizhong Wang
Brijesh Kumar
Poornima Bhat-Nakshatri
Aditi S. Khatpe
Michael P. Murphy
Kristen E. Wanczyk
Edward Simpson
Duojiao Chen
Hongyu Gao
Yunlong Liu
Emma H. Doud
Amber L. Mosley
Harikrishna Nakshatri
author_sort Ruizhong Wang
collection DOAJ
description Summary: Skeletal muscle dysfunction or reprogramming due to the effects of the cancer secretome is observed in multiple malignancies. Although mouse models are routinely used to study skeletal muscle defects in cancer, because of species specificity of certain cytokines/chemokines in the secretome, a human model system is required. Here, we establish simplified multiple skeletal muscle stem cell lines (hMuSCs), which can be differentiated into myotubes. Using single nuclei ATAC-seq (snATAC-seq) and RNA-seq (snRNA-seq), we document chromatin accessibility and transcriptomic changes associated with the transition of hMuSCs to myotubes. Cancer secretome accelerated stem to myotube differentiation, altered the alternative splicing machinery and increased inflammatory, glucocorticoid receptor, and wound healing pathways in hMuSCs. Additionally, cancer secretome reduced metabolic and survival pathway associated miR-486, AKT, and p53 signaling in hMuSCs. hMuSCs underwent myotube differentiation when engrafted into NSG mice and thus providing a humanized in vivo skeletal muscle model system to study cancer cachexia.
first_indexed 2024-04-09T18:15:17Z
format Article
id doaj.art-1438aa9d57ba4cedbd600e0d5b03d86c
institution Directory Open Access Journal
issn 2589-0042
language English
last_indexed 2024-04-09T18:15:17Z
publishDate 2023-04-01
publisher Elsevier
record_format Article
series iScience
spelling doaj.art-1438aa9d57ba4cedbd600e0d5b03d86c2023-04-13T04:27:01ZengElsevieriScience2589-00422023-04-01264106541A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscleRuizhong Wang0Brijesh Kumar1Poornima Bhat-Nakshatri2Aditi S. Khatpe3Michael P. Murphy4Kristen E. Wanczyk5Edward Simpson6Duojiao Chen7Hongyu Gao8Yunlong Liu9Emma H. Doud10Amber L. Mosley11Harikrishna Nakshatri12Department of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA; VA Roudebush Medical Center, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA; VA Roudebush Medical Center, Indianapolis, IN 46202, USACenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USACenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USACenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USACenter for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USADepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA; Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA; Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA; VA Roudebush Medical Center, Indianapolis, IN 46202, USA; Corresponding authorSummary: Skeletal muscle dysfunction or reprogramming due to the effects of the cancer secretome is observed in multiple malignancies. Although mouse models are routinely used to study skeletal muscle defects in cancer, because of species specificity of certain cytokines/chemokines in the secretome, a human model system is required. Here, we establish simplified multiple skeletal muscle stem cell lines (hMuSCs), which can be differentiated into myotubes. Using single nuclei ATAC-seq (snATAC-seq) and RNA-seq (snRNA-seq), we document chromatin accessibility and transcriptomic changes associated with the transition of hMuSCs to myotubes. Cancer secretome accelerated stem to myotube differentiation, altered the alternative splicing machinery and increased inflammatory, glucocorticoid receptor, and wound healing pathways in hMuSCs. Additionally, cancer secretome reduced metabolic and survival pathway associated miR-486, AKT, and p53 signaling in hMuSCs. hMuSCs underwent myotube differentiation when engrafted into NSG mice and thus providing a humanized in vivo skeletal muscle model system to study cancer cachexia.http://www.sciencedirect.com/science/article/pii/S2589004223006181Cancer systems biologyCell biologyMolecular biology
spellingShingle Ruizhong Wang
Brijesh Kumar
Poornima Bhat-Nakshatri
Aditi S. Khatpe
Michael P. Murphy
Kristen E. Wanczyk
Edward Simpson
Duojiao Chen
Hongyu Gao
Yunlong Liu
Emma H. Doud
Amber L. Mosley
Harikrishna Nakshatri
A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
iScience
Cancer systems biology
Cell biology
Molecular biology
title A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
title_full A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
title_fullStr A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
title_full_unstemmed A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
title_short A human skeletal muscle stem/myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
title_sort human skeletal muscle stem myotube model reveals multiple signaling targets of cancer secretome in skeletal muscle
topic Cancer systems biology
Cell biology
Molecular biology
url http://www.sciencedirect.com/science/article/pii/S2589004223006181
work_keys_str_mv AT ruizhongwang ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT brijeshkumar ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT poornimabhatnakshatri ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT aditiskhatpe ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT michaelpmurphy ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT kristenewanczyk ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT edwardsimpson ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT duojiaochen ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT hongyugao ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT yunlongliu ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT emmahdoud ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT amberlmosley ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT harikrishnanakshatri ahumanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT ruizhongwang humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT brijeshkumar humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT poornimabhatnakshatri humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT aditiskhatpe humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT michaelpmurphy humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT kristenewanczyk humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT edwardsimpson humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT duojiaochen humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT hongyugao humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT yunlongliu humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT emmahdoud humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT amberlmosley humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle
AT harikrishnanakshatri humanskeletalmusclestemmyotubemodelrevealsmultiplesignalingtargetsofcancersecretomeinskeletalmuscle