High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance
Increasing globalization, agricultural intensification, urbanization, and climatic changes have resulted in a significant recent increase in emerging infectious zoonotic diseases. Zoonotic diseases are becoming more common, so innovative, effective, and integrative research is required to better und...
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| Format: | Article |
| Language: | English |
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Elsevier
2022-01-01
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| Series: | Computational and Structural Biotechnology Journal |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S2001037022004330 |
| _version_ | 1797978126000586752 |
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| author | Godagama Gamaarachchige Dinesh Suminda Srishti Bhandari Yoonkyung Won Umesh Goutam Krishna Kanth Pulicherla Young-Ok Son Mrinmoy Ghosh |
| author_facet | Godagama Gamaarachchige Dinesh Suminda Srishti Bhandari Yoonkyung Won Umesh Goutam Krishna Kanth Pulicherla Young-Ok Son Mrinmoy Ghosh |
| author_sort | Godagama Gamaarachchige Dinesh Suminda |
| collection | DOAJ |
| description | Increasing globalization, agricultural intensification, urbanization, and climatic changes have resulted in a significant recent increase in emerging infectious zoonotic diseases. Zoonotic diseases are becoming more common, so innovative, effective, and integrative research is required to better understand their transmission, ecological implications, and dynamics at wildlife-human interfaces. High-throughput sequencing (HTS) methodologies have enormous potential for unraveling these contingencies and improving our understanding, but they are only now beginning to be realized in livestock research. This study investigates the current state of use of sequencing technologies in the detection of livestock pathogens such as bovine, dogs (Canis lupus familiaris), sheep (Ovis aries), pigs (Sus scrofa), horses (Equus caballus), chicken (Gallus gallus domesticus), and ducks (Anatidae) as well as how it can improve the monitoring and detection of zoonotic infections. We also described several high-throughput sequencing approaches for improved detection of known, unknown, and emerging infectious agents, resulting in better infectious disease diagnosis, as well as surveillance of zoonotic infectious diseases. In the coming years, the continued advancement of sequencing technologies will improve livestock research and hasten the development of various new genomic and technological studies on farm animals. |
| first_indexed | 2024-04-11T05:18:04Z |
| format | Article |
| id | doaj.art-1461fc2e3ea44fbcbbaf8f586f9353f0 |
| institution | Directory Open Access Journal |
| issn | 2001-0370 |
| language | English |
| last_indexed | 2024-04-11T05:18:04Z |
| publishDate | 2022-01-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Computational and Structural Biotechnology Journal |
| spelling | doaj.art-1461fc2e3ea44fbcbbaf8f586f9353f02022-12-24T04:54:33ZengElsevierComputational and Structural Biotechnology Journal2001-03702022-01-012053785392High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillanceGodagama Gamaarachchige Dinesh Suminda0Srishti Bhandari1Yoonkyung Won2Umesh Goutam3Krishna Kanth Pulicherla4Young-Ok Son5Mrinmoy Ghosh6Interdisciplinary Graduate Program in Advanced Convergence Technology and Science, Jeju National University, Jeju-si 63243, Republic of KoreaDepartment of Molecular Biology and Genetic Engineering, School of Bioengineering and Biosciences, Lovely Professional University, Punjab, IndiaSection of Surgical Sciences and Epithelial Biology Center, Vanderbilt University Medical Center, Nashville, TN, USADepartment of Molecular Biology and Genetic Engineering, School of Bioengineering and Biosciences, Lovely Professional University, Punjab, IndiaDepartment of Science and Technology, Ministry of Science and Technology, Govt. of India, Technology Bhavan, New Delhi, IndiaInterdisciplinary Graduate Program in Advanced Convergence Technology and Science, Jeju National University, Jeju-si 63243, Republic of Korea; Department of Animal Biotechnology, Faculty of Biotechnology, College of Applied Life Sciences, Jeju National University, Jeju-si 63243, Republic of Korea; Bio-Health Materials Core-Facility Center, Jeju National University, Jeju-si 63243, Republic of Korea; Corresponding authors.Department of Animal Biotechnology, Faculty of Biotechnology, College of Applied Life Sciences, Jeju National University, Jeju-si 63243, Republic of Korea; Department of Biotechnology, School of Bio, Chemical and Processing Engineering (SBCE), Kalasalin-gam Academy of Research and Educational, Krishnankoil 626126, India; Corresponding authors.Increasing globalization, agricultural intensification, urbanization, and climatic changes have resulted in a significant recent increase in emerging infectious zoonotic diseases. Zoonotic diseases are becoming more common, so innovative, effective, and integrative research is required to better understand their transmission, ecological implications, and dynamics at wildlife-human interfaces. High-throughput sequencing (HTS) methodologies have enormous potential for unraveling these contingencies and improving our understanding, but they are only now beginning to be realized in livestock research. This study investigates the current state of use of sequencing technologies in the detection of livestock pathogens such as bovine, dogs (Canis lupus familiaris), sheep (Ovis aries), pigs (Sus scrofa), horses (Equus caballus), chicken (Gallus gallus domesticus), and ducks (Anatidae) as well as how it can improve the monitoring and detection of zoonotic infections. We also described several high-throughput sequencing approaches for improved detection of known, unknown, and emerging infectious agents, resulting in better infectious disease diagnosis, as well as surveillance of zoonotic infectious diseases. In the coming years, the continued advancement of sequencing technologies will improve livestock research and hasten the development of various new genomic and technological studies on farm animals.http://www.sciencedirect.com/science/article/pii/S2001037022004330Domestic animalsHigh-throughput sequencingNext-generation sequencingInfectious diseasesZoonotic pathogens |
| spellingShingle | Godagama Gamaarachchige Dinesh Suminda Srishti Bhandari Yoonkyung Won Umesh Goutam Krishna Kanth Pulicherla Young-Ok Son Mrinmoy Ghosh High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance Computational and Structural Biotechnology Journal Domestic animals High-throughput sequencing Next-generation sequencing Infectious diseases Zoonotic pathogens |
| title | High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance |
| title_full | High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance |
| title_fullStr | High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance |
| title_full_unstemmed | High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance |
| title_short | High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance |
| title_sort | high throughput sequencing technologies in the detection of livestock pathogens diagnosis and zoonotic surveillance |
| topic | Domestic animals High-throughput sequencing Next-generation sequencing Infectious diseases Zoonotic pathogens |
| url | http://www.sciencedirect.com/science/article/pii/S2001037022004330 |
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