Data Employed in the Construction of a Composite Protein Database for Proteogenomic Analyses of Cephalopods Salivary Apparatus

Data Employed in the Construction of a Composite Protein Database for Proteogenomic Analyses of Cephalopods Salivary Apparatus

Here we provide all datasets and details applied in the construction of a composite protein database required for the proteogenomic analyses of the article “Putative Antimicrobial Peptides of the Posterior Salivary Glands from the Cephalopod <i>Octopus vulgaris</i> Revealed by Exploring...

Full description

Bibliographic Details
Main Authors:	Daniela Almeida, Dany Domínguez-Pérez, Ana Matos, Guillermin Agüero-Chapin, Yuselis Castaño, Vitor Vasconcelos, Alexandre Campos, Agostinho Antunes
Format:	Article
Language:	English
Published:	MDPI AG 2020-11-01
Series:	Data
Subjects:	<i>Octopus vulgaris</i> shotgun proteomics Q-Exactive transcriptome <i>de novo</i> assembly mass spectrometry-based proteomics TransDecoder
Online Access:	https://www.mdpi.com/2306-5729/5/4/110

Similar Items

Shotgun Proteomics of Ascidians Tunic Gives New Insights on Host–Microbe Interactions by Revealing Diverse Antimicrobial Peptides
by: Ana Matos, et al.
Published: (2020-07-01)

Identifying Natural Bioactive Peptides from the Common Octopus (<i>Octopus vulgaris</i> Cuvier, 1797) Skin Mucus By-Products Using Proteogenomic Analysis
by: Sara Pérez-Polo, et al.
Published: (2023-04-01)

Proteogenomic Study of the Effect of an Improved Mixed Diet of Live Preys on the Aquaculture of Octopus vulgaris Paralarvae
by: Inmaculada Varó, et al.
Published: (2022-02-01)

Proteogenomic Characterization of the Cement and Adhesive Gland of the Pelagic Gooseneck Barnacle <i>Lepas anatifera</i>
by: Dany Domínguez-Pérez, et al.
Published: (2021-03-01)

Increasing Coverage of Proteome Identification of the Fruiting Body of <i>Agaricus bisporus</i> by Shotgun Proteomics
by: Tae-Ho Ham, et al.
Published: (2020-05-01)

Comprehensive Organ-Specific Profiling of Douglas Fir (<i>Pseudotsuga menziesii</i>) Proteome
by: Caroline Teyssier, et al.
Published: (2023-09-01)

Proteomics and Interspecies Interaction Analysis Revealed Abscisic Acid Signalling to Be the Primary Driver for Oil Palm’s Response against Red Palm Weevil Infestation
by: Nazmi Harith-Fadzilah, et al.
Published: (2021-11-01)

<i>Bacillus cereus</i> Decreases NHE and CLO Exotoxin Synthesis to Maintain Appropriate Proteome Dynamics During Growth at Low Temperature
by: Catherine Duport, et al.
Published: (2020-10-01)

A New Rapid Method for the Authentication of Common Octopus (<i>Octopus vulgaris</i>) in Seafood Products Using Recombinase Polymerase Amplification (RPA) and Lateral Flow Assay (LFA)
by: Amaya Velasco, et al.
Published: (2021-08-01)

Yeast Ribonucleotide Reductase Is a Direct Target of the Proteasome and Provides Hyper Resistance to the Carcinogen 4-NQO
by: Daria S. Spasskaya, et al.
Published: (2023-03-01)

Proteogenomic Analysis of <i>Burkholderia</i> Species Strains 25 and 46 Isolated from Uraniferous Soils Reveals Multiple Mechanisms to Cope with Uranium Stress
by: Meenakshi Agarwal, et al.
Published: (2018-12-01)

Physiological and Metabolic Responses of Marine Mussels Exposed to Toxic Cyanobacteria <i>Microcystis aeruginosa</i> and <i>Chrysosporum ovalisporum</i>
by: Flavio Oliveira, et al.
Published: (2020-03-01)

Endophytic Bacterium <i>Flexivirga meconopsidis</i> sp. nov. with Plant Growth-Promoting Function, Isolated from the Seeds of <i>Meconopsis integrifolia</i>
by: Yongtao Kan, et al.
Published: (2023-11-01)

Dietary Effect on the Proteome of the Common Octopus (Octopus vulgaris) Paralarvae
by: Inmaculada Varó, et al.
Published: (2017-05-01)

OctoPartenopin: Identification and Preliminary Characterization of a Novel Antimicrobial Peptide from the Suckers of <i>Octopus vulgaris</i>
by: Valeria Maselli, et al.
Published: (2020-07-01)

Proteomic Analysis Reveals a Critical Role of the Glycosyl Hydrolase 17 Protein in <i>Panax ginseng</i> Leaves under Salt Stress
by: Ju-Young Jung, et al.
Published: (2023-02-01)

Proteogenomic analysis of pitaya reveals cold stress-related molecular signature
by: Junliang Zhou, et al.
Published: (2020-02-01)

Secretome Profiling by Proteogenomic Analysis Shows Species-Specific, Temperature-Dependent, and Putative Virulence Proteins of <i>Pythium insidiosum</i>
by: Theerapong Krajaejun, et al.
Published: (2022-05-01)

Mining the Wheat Grain Proteome
by: Delphine Vincent, et al.
Published: (2022-01-01)

Performance of Marine Lecithin Supplemented Feeds for the Common Octopus (<i>Octopus vulgaris</i>) Ongrowing: Changes in Proximate Composition and Lipid Classes’ Profile
by: Tania Rodríguez-González, et al.
Published: (2019-09-01)

Insights on the Evolutionary History and Genetic Patterns of <i>Octopus vulgaris</i> Cuvier, 1797 in the Northeastern Atlantic Using Mitochondrial DNA
by: Trinidad Pérez, et al.
Published: (2023-08-01)

Preservative Effect on Canned Mackerel (<i>Scomber colias</i>) Lipids by Addition of Octopus (<i>Octopus vulgaris</i>) Cooking Liquor in the Packaging Medium
by: José M. Malga, et al.
Published: (2022-01-01)

Neuroendocrine-immune systems response to environmental stressors in the cephalopod Octopus vulgaris
by: Anna Di Cosmo, et al.
Published: (2016-09-01)

Proteomics, Holm Oak (<i>Quercus ilex L.</i>) and Other Recalcitrant and Orphan Forest Tree Species: How do They See Each Other?
by: María-Dolores Rey, et al.
Published: (2019-02-01)

Sensorial Hierarchy in <i>Octopus vulgaris’s</i> Food Choice: Chemical vs. Visual
by: Valeria Maselli, et al.
Published: (2020-03-01)

Can Cephalopods Vomit? Hypothesis Based on a Review of Circumstantial Evidence and Preliminary Experimental Observations
by: António V. Sykes, et al.
Published: (2020-07-01)

What Do We See in Spectra?: Assignment of High-Intensity Peaks of <em>Cutibacterium</em> and <em>Staphylococcus</em> Spectra of MALDI-TOF Mass Spectrometry by Interspecies Comparative Proteogenomics
by: Itaru Dekio, et al.
Published: (2021-06-01)

Wild and Cultivated Species of Rice Have Distinctive Proteomic Responses to Drought
by: Sara Hamzelou, et al.
Published: (2020-08-01)

The Use of Isoflurane and Adjunctive Magnesium Chloride Provides Fast, Effective Anaesthetization of <i>Octopus vulgaris</i>
by: Anna Di Cosmo, et al.
Published: (2023-11-01)

Physiological Responses of Common Bean Genotypes to Drought Stress
by: Petko Mladenov, et al.
Published: (2023-03-01)

CADMIUM IN OCTOPUS VULGARIS: AN INPUT TO ASSESS HUMAN HEALTH RISK
by: E. Bonerba, et al.
Published: (2009-12-01)

An Update of the Virion Proteome of Kaposi Sarcoma-Associated Herpesvirus
by: Ramina Nabiee, et al.
Published: (2020-12-01)

Cephalopod Experimental Projected Habitat (CEPH): Virtual Reality for Underwater Organisms
by: Noam Josef, et al.
Published: (2018-03-01)

The Effect of Prohibitins on Mitochondrial Function during <i>Octopus tankahkeei</i> Spermiogenesis
by: Jingqian Wang, et al.
Published: (2023-06-01)

The Utility of Genomic and Transcriptomic Data in the Construction of Proxy Protein Sequence Databases for Unsequenced Tree Nuts
by: Cary Pirone-Davies, et al.
Published: (2020-05-01)

Dichloromethane Degradation Pathway from Unsequenced <i>Hyphomicrobium</i> sp. MC8b Rapidly Explored by Pan-Proteomics
by: Karim Hayoun, et al.
Published: (2020-11-01)

Proteomic Characterization of Two Medically Important Malaysian Snake Venoms, <i>Calloselasma rhodostoma</i> (Malayan Pit Viper) and <i>Ophiophagus hannah</i> (King Cobra)
by: Sugita Kunalan, et al.
Published: (2018-10-01)

The State of the Art in Transcriptomics and Proteomics of Clinically Relevant <i>Sporothrix</i> Species
by: Anna Carolina Procópio-Azevedo, et al.
Published: (2023-07-01)

Exploration of the Nuclear Proteomes in the Ciliate <i>Oxytricha trifallax</i>
by: Michael W. Lu, et al.
Published: (2023-01-01)

Effects of Excess Manganese on the Xylem Sap Protein Profile of Tomato (<i>Solanum lycopersicum</i>) as Revealed by Shotgun Proteomic Analysis
by: Laura Ceballos-Laita, et al.
Published: (2020-11-01)