PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES
The article deals with the architecture of metadata storage model for check results of three-dimensional protein structures. Concept database model was built. The service and procedure of database update as well as data transformation algorithms for protein structures and their quality were presente...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University)
2013-01-01
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| Series: | Naučno-tehničeskij Vestnik Informacionnyh Tehnologij, Mehaniki i Optiki |
| Subjects: | |
| Online Access: | http://openbooks.ifmo.ru/read_ntv/4061/4061.pdf |
| _version_ | 1818213730422358016 |
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| author | T. A. Nikitin Y. B. Porozov |
| author_facet | T. A. Nikitin Y. B. Porozov |
| author_sort | T. A. Nikitin |
| collection | DOAJ |
| description | The article deals with the architecture of metadata storage model for check results of three-dimensional protein structures. Concept database model was built. The service and procedure of database update as well as data transformation algorithms for protein structures and their quality were presented. Most important information about entries and their submission forms to store, access, and delivery to users were highlighted. Software suite was developed for the implementation of functional tasks using Java programming language in the NetBeans v.7.0 environment and JQL to query and interact with the database JavaDB. The service was tested and results have shown system effectiveness while protein structures filtration. |
| first_indexed | 2024-12-12T06:08:56Z |
| format | Article |
| id | doaj.art-14e29feff580401f8a8e239b019615ab |
| institution | Directory Open Access Journal |
| issn | 2226-1494 2500-0373 |
| language | English |
| last_indexed | 2024-12-12T06:08:56Z |
| publishDate | 2013-01-01 |
| publisher | Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University) |
| record_format | Article |
| series | Naučno-tehničeskij Vestnik Informacionnyh Tehnologij, Mehaniki i Optiki |
| spelling | doaj.art-14e29feff580401f8a8e239b019615ab2022-12-22T00:35:12ZengSaint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University)Naučno-tehničeskij Vestnik Informacionnyh Tehnologij, Mehaniki i Optiki2226-14942500-03732013-01-011319499PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTUREST. A. NikitinY. B. PorozovThe article deals with the architecture of metadata storage model for check results of three-dimensional protein structures. Concept database model was built. The service and procedure of database update as well as data transformation algorithms for protein structures and their quality were presented. Most important information about entries and their submission forms to store, access, and delivery to users were highlighted. Software suite was developed for the implementation of functional tasks using Java programming language in the NetBeans v.7.0 environment and JQL to query and interact with the database JavaDB. The service was tested and results have shown system effectiveness while protein structures filtration.http://openbooks.ifmo.ru/read_ntv/4061/4061.pdfprogram systeminformation bankprotein structurePDBstructure qualitychecking servermetadata |
| spellingShingle | T. A. Nikitin Y. B. Porozov PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES Naučno-tehničeskij Vestnik Informacionnyh Tehnologij, Mehaniki i Optiki program system information bank protein structure PDB structure quality checking server metadata |
| title | PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES |
| title_full | PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES |
| title_fullStr | PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES |
| title_full_unstemmed | PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES |
| title_short | PROGRAM SYSTEM AND INFORMATION METADATA BANK OF TERTIARY PROTEIN STRUCTURES |
| title_sort | program system and information metadata bank of tertiary protein structures |
| topic | program system information bank protein structure PDB structure quality checking server metadata |
| url | http://openbooks.ifmo.ru/read_ntv/4061/4061.pdf |
| work_keys_str_mv | AT tanikitin programsystemandinformationmetadatabankoftertiaryproteinstructures AT ybporozov programsystemandinformationmetadatabankoftertiaryproteinstructures |