The complete chloroplast genome sequence of Smilax microphylla C. H. Wright
Smilax microphylla C. H. Wright is a climbing shrub that can be used for herbal medicine. The complete chloroplast genome sequence of S. microphylla was determined in this study. It is 158,246 bp in length with a GC content of 37.12%, and consists of a pair of inverted repeat (IR) regions of 27,175 ...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-08-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1947914 |
| _version_ | 1797638763004821504 |
|---|---|
| author | Feng Wu Daqu Liang Jingyi Yang |
| author_facet | Feng Wu Daqu Liang Jingyi Yang |
| author_sort | Feng Wu |
| collection | DOAJ |
| description | Smilax microphylla C. H. Wright is a climbing shrub that can be used for herbal medicine. The complete chloroplast genome sequence of S. microphylla was determined in this study. It is 158,246 bp in length with a GC content of 37.12%, and consists of a pair of inverted repeat (IR) regions of 27,175 bp, a large single copy (LSC) region of 85,229 bp, and a small single copy (SSC) region of 18,667 bp. The genome encoded 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that S. microphylla is phylogenetically closely related to Smilax china and Smilax nipponica. |
| first_indexed | 2024-03-11T13:08:09Z |
| format | Article |
| id | doaj.art-14f6370cf4174efdb7834a19ed0a9b63 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:09Z |
| publishDate | 2021-08-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-14f6370cf4174efdb7834a19ed0a9b632023-11-03T14:28:28ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-08-01682235223610.1080/23802359.2021.19479141947914The complete chloroplast genome sequence of Smilax microphylla C. H. WrightFeng Wu0Daqu Liang1Jingyi Yang2Institute for Forest Resources & Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou UniversityInstitute for Forest Resources & Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou UniversityCollege of Forestry, Guizhou UniversitySmilax microphylla C. H. Wright is a climbing shrub that can be used for herbal medicine. The complete chloroplast genome sequence of S. microphylla was determined in this study. It is 158,246 bp in length with a GC content of 37.12%, and consists of a pair of inverted repeat (IR) regions of 27,175 bp, a large single copy (LSC) region of 85,229 bp, and a small single copy (SSC) region of 18,667 bp. The genome encoded 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that S. microphylla is phylogenetically closely related to Smilax china and Smilax nipponica.http://dx.doi.org/10.1080/23802359.2021.1947914smilax microphyllachloroplast genomephylogenetic analysis |
| spellingShingle | Feng Wu Daqu Liang Jingyi Yang The complete chloroplast genome sequence of Smilax microphylla C. H. Wright Mitochondrial DNA. Part B. Resources smilax microphylla chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Smilax microphylla C. H. Wright |
| title_full | The complete chloroplast genome sequence of Smilax microphylla C. H. Wright |
| title_fullStr | The complete chloroplast genome sequence of Smilax microphylla C. H. Wright |
| title_full_unstemmed | The complete chloroplast genome sequence of Smilax microphylla C. H. Wright |
| title_short | The complete chloroplast genome sequence of Smilax microphylla C. H. Wright |
| title_sort | complete chloroplast genome sequence of smilax microphylla c h wright |
| topic | smilax microphylla chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1947914 |
| work_keys_str_mv | AT fengwu thecompletechloroplastgenomesequenceofsmilaxmicrophyllachwright AT daquliang thecompletechloroplastgenomesequenceofsmilaxmicrophyllachwright AT jingyiyang thecompletechloroplastgenomesequenceofsmilaxmicrophyllachwright AT fengwu completechloroplastgenomesequenceofsmilaxmicrophyllachwright AT daquliang completechloroplastgenomesequenceofsmilaxmicrophyllachwright AT jingyiyang completechloroplastgenomesequenceofsmilaxmicrophyllachwright |