A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra
The Tomographic Quantitative Electroencephalography (qEEGt) toolbox is integrated with the Montreal Neurological Institute (MNI) Neuroinformatics Ecosystem as a docker into the Canadian Brain Imaging Research Platform (CBRAIN). qEEGt produces age-corrected normative Statistical Parametric Maps of EE...
| Main Authors: | , , , , , , , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
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Frontiers Media S.A.
2020-08-01
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| Series: | Frontiers in Neuroinformatics |
| Subjects: | |
| Online Access: | https://www.frontiersin.org/article/10.3389/fninf.2020.00033/full |
| _version_ | 1819174936445452288 |
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| author | Jorge Bosch-Bayard Jorge Bosch-Bayard Jorge Bosch-Bayard Eduardo Aubert-Vazquez Shawn T. Brown Christine Rogers Gregory Kiar Tristan Glatard Lalet Scaria Lidice Galan-Garcia Maria L. Bringas-Vega Maria L. Bringas-Vega Trinidad Virues-Alba Armin Taheri Samir Das Cecile Madjar Zia Mohaddes Leigh MacIntyre CHBMP Alan C. Evans Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa |
| author_facet | Jorge Bosch-Bayard Jorge Bosch-Bayard Jorge Bosch-Bayard Eduardo Aubert-Vazquez Shawn T. Brown Christine Rogers Gregory Kiar Tristan Glatard Lalet Scaria Lidice Galan-Garcia Maria L. Bringas-Vega Maria L. Bringas-Vega Trinidad Virues-Alba Armin Taheri Samir Das Cecile Madjar Zia Mohaddes Leigh MacIntyre CHBMP Alan C. Evans Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa |
| author_sort | Jorge Bosch-Bayard |
| collection | DOAJ |
| description | The Tomographic Quantitative Electroencephalography (qEEGt) toolbox is integrated with the Montreal Neurological Institute (MNI) Neuroinformatics Ecosystem as a docker into the Canadian Brain Imaging Research Platform (CBRAIN). qEEGt produces age-corrected normative Statistical Parametric Maps of EEG log source spectra testing compliance to a normative database. This toolbox was developed at the Cuban Neuroscience Center as part of the first wave of the Cuban Human Brain Mapping Project (CHBMP) and has been validated and used in different health systems for several decades. Incorporation into the MNI ecosystem now provides CBRAIN registered users access to its full functionality and is accompanied by a public release of the source code on GitHub and Zenodo repositories. Among other features are the calculation of EEG scalp spectra, and the estimation of their source spectra using the Variable Resolution Electrical Tomography (VARETA) source imaging. Crucially, this is completed by the evaluation of z spectra by means of the built-in age regression equations obtained from the CHBMP database (ages 5–87) to provide normative Statistical Parametric Mapping of EEG log source spectra. Different scalp and source visualization tools are also provided for evaluation of individual subjects prior to further post-processing. Openly releasing this software in the CBRAIN platform will facilitate the use of standardized qEEGt methods in different research and clinical settings. An updated precis of the methods is provided in Appendix I as a reference for the toolbox. qEEGt/CBRAIN is the first installment of instruments developed by the neuroinformatic platform of the Cuba-Canada-China (CCC) project. |
| first_indexed | 2024-12-22T20:46:53Z |
| format | Article |
| id | doaj.art-15efcb671bdc4bc5976e473ad8d9c7ba |
| institution | Directory Open Access Journal |
| issn | 1662-5196 |
| language | English |
| last_indexed | 2024-12-22T20:46:53Z |
| publishDate | 2020-08-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Neuroinformatics |
| spelling | doaj.art-15efcb671bdc4bc5976e473ad8d9c7ba2022-12-21T18:13:12ZengFrontiers Media S.A.Frontiers in Neuroinformatics1662-51962020-08-011410.3389/fninf.2020.00033471980A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source SpectraJorge Bosch-Bayard0Jorge Bosch-Bayard1Jorge Bosch-Bayard2Eduardo Aubert-Vazquez3Shawn T. Brown4Christine Rogers5Gregory Kiar6Tristan Glatard7Lalet Scaria8Lidice Galan-Garcia9Maria L. Bringas-Vega10Maria L. Bringas-Vega11Trinidad Virues-Alba12Armin Taheri13Samir Das14Cecile Madjar15Zia Mohaddes16Leigh MacIntyre17CHBMP18Alan C. Evans19Pedro A. Valdes-Sosa20Pedro A. Valdes-Sosa21Pedro A. Valdes-Sosa22The Clinical Hospital of Chengdu Brain Sciences Institute, University of Electronic Science and Technology of China UESTC, Chengdu, ChinaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaCuban Neuroscience Centre, Havana, CubaCuban Neuroscience Centre, Havana, CubaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaCuban Neuroscience Centre, Havana, CubaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaCuban Neuroscience Centre, Havana, CubaCuban Neuroscience Centre, Havana, CubaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaCuban Neuroscience Centre, Havana, CubaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaThe Clinical Hospital of Chengdu Brain Sciences Institute, University of Electronic Science and Technology of China UESTC, Chengdu, ChinaMcGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montreal, QC, CanadaCuban Neuroscience Centre, Havana, CubaThe Tomographic Quantitative Electroencephalography (qEEGt) toolbox is integrated with the Montreal Neurological Institute (MNI) Neuroinformatics Ecosystem as a docker into the Canadian Brain Imaging Research Platform (CBRAIN). qEEGt produces age-corrected normative Statistical Parametric Maps of EEG log source spectra testing compliance to a normative database. This toolbox was developed at the Cuban Neuroscience Center as part of the first wave of the Cuban Human Brain Mapping Project (CHBMP) and has been validated and used in different health systems for several decades. Incorporation into the MNI ecosystem now provides CBRAIN registered users access to its full functionality and is accompanied by a public release of the source code on GitHub and Zenodo repositories. Among other features are the calculation of EEG scalp spectra, and the estimation of their source spectra using the Variable Resolution Electrical Tomography (VARETA) source imaging. Crucially, this is completed by the evaluation of z spectra by means of the built-in age regression equations obtained from the CHBMP database (ages 5–87) to provide normative Statistical Parametric Mapping of EEG log source spectra. Different scalp and source visualization tools are also provided for evaluation of individual subjects prior to further post-processing. Openly releasing this software in the CBRAIN platform will facilitate the use of standardized qEEGt methods in different research and clinical settings. An updated precis of the methods is provided in Appendix I as a reference for the toolbox. qEEGt/CBRAIN is the first installment of instruments developed by the neuroinformatic platform of the Cuba-Canada-China (CCC) project.https://www.frontiersin.org/article/10.3389/fninf.2020.00033/fullStatistical Parametric MappingqEEGtCBRAINEEG tomographyquantitative EEGopen science |
| spellingShingle | Jorge Bosch-Bayard Jorge Bosch-Bayard Jorge Bosch-Bayard Eduardo Aubert-Vazquez Shawn T. Brown Christine Rogers Gregory Kiar Tristan Glatard Lalet Scaria Lidice Galan-Garcia Maria L. Bringas-Vega Maria L. Bringas-Vega Trinidad Virues-Alba Armin Taheri Samir Das Cecile Madjar Zia Mohaddes Leigh MacIntyre CHBMP Alan C. Evans Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa Pedro A. Valdes-Sosa A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra Frontiers in Neuroinformatics Statistical Parametric Mapping qEEGt CBRAIN EEG tomography quantitative EEG open science |
| title | A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra |
| title_full | A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra |
| title_fullStr | A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra |
| title_full_unstemmed | A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra |
| title_short | A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra |
| title_sort | quantitative eeg toolbox for the mni neuroinformatics ecosystem normative spm of eeg source spectra |
| topic | Statistical Parametric Mapping qEEGt CBRAIN EEG tomography quantitative EEG open science |
| url | https://www.frontiersin.org/article/10.3389/fninf.2020.00033/full |
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