Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells

Abstract Intracellular Ca2+ signals control several physiological and pathophysiological processes. The main tool to chelate intracellular Ca2+ is intracellular BAPTA (BAPTAi), usually introduced into cells as a membrane-permeant acetoxymethyl ester (BAPTA-AM). Previously, we demonstrated that BAPTA...

Full description

Bibliographic Details
Main Authors: Flore Sneyers, Martijn Kerkhofs, Femke Speelman-Rooms, Kirsten Welkenhuyzen, Rita La Rovere, Ahmed Shemy, Arnout Voet, Guy Eelen, Mieke Dewerchin, Stephen W. G. Tait, Bart Ghesquière, Martin D. Bootman, Geert Bultynck
Format: Article
Language:English
Published: Nature Publishing Group 2023-09-01
Series:Cell Death and Disease
Online Access:https://doi.org/10.1038/s41419-023-06120-4
_version_ 1827821197149077504
author Flore Sneyers
Martijn Kerkhofs
Femke Speelman-Rooms
Kirsten Welkenhuyzen
Rita La Rovere
Ahmed Shemy
Arnout Voet
Guy Eelen
Mieke Dewerchin
Stephen W. G. Tait
Bart Ghesquière
Martin D. Bootman
Geert Bultynck
author_facet Flore Sneyers
Martijn Kerkhofs
Femke Speelman-Rooms
Kirsten Welkenhuyzen
Rita La Rovere
Ahmed Shemy
Arnout Voet
Guy Eelen
Mieke Dewerchin
Stephen W. G. Tait
Bart Ghesquière
Martin D. Bootman
Geert Bultynck
author_sort Flore Sneyers
collection DOAJ
description Abstract Intracellular Ca2+ signals control several physiological and pathophysiological processes. The main tool to chelate intracellular Ca2+ is intracellular BAPTA (BAPTAi), usually introduced into cells as a membrane-permeant acetoxymethyl ester (BAPTA-AM). Previously, we demonstrated that BAPTAi enhanced apoptosis induced by venetoclax, a BCL-2 antagonist, in diffuse large B-cell lymphoma (DLBCL). This finding implied a novel interplay between intracellular Ca2+ signaling and anti-apoptotic BCL-2 function. Hence, we set out to identify the underlying mechanisms by which BAPTAi enhances cell death in B-cell cancers. In this study, we discovered that BAPTAi alone induced apoptosis in hematological cancer cell lines that were highly sensitive to S63845, an MCL-1 antagonist. BAPTAi provoked a rapid decline in MCL-1-protein levels by inhibiting mTORC1-driven Mcl-1 translation. These events were not a consequence of cell death, as BAX/BAK-deficient cancer cells exhibited similar downregulation of mTORC1 activity and MCL-1-protein levels. Next, we investigated how BAPTAi diminished mTORC1 activity and identified its ability to impair glycolysis by directly inhibiting 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (PFKFB3) activity, a previously unknown effect of BAPTAi. Notably, these effects were also induced by a BAPTAi analog with low affinity for Ca2+. Consequently, our findings uncover PFKFB3 inhibition as an Ca2+-independent mechanism through which BAPTAi impairs cellular metabolism and ultimately compromises the survival of MCL-1-dependent cancer cells. These findings hold two important implications. Firstly, the direct inhibition of PFKFB3 emerges as a key regulator of mTORC1 activity and a promising target in MCL-1-dependent cancers. Secondly, cellular effects caused by BAPTAi are not necessarily related to Ca2+ signaling. Our data support the need for a reassessment of the role of Ca2+ in cellular processes when findings were based on the use of BAPTAi.
first_indexed 2024-03-12T01:39:54Z
format Article
id doaj.art-165f5a0201694ead8a06898f90b65886
institution Directory Open Access Journal
issn 2041-4889
language English
last_indexed 2024-03-12T01:39:54Z
publishDate 2023-09-01
publisher Nature Publishing Group
record_format Article
series Cell Death and Disease
spelling doaj.art-165f5a0201694ead8a06898f90b658862023-09-10T11:28:17ZengNature Publishing GroupCell Death and Disease2041-48892023-09-0114911710.1038/s41419-023-06120-4Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cellsFlore Sneyers0Martijn Kerkhofs1Femke Speelman-Rooms2Kirsten Welkenhuyzen3Rita La Rovere4Ahmed Shemy5Arnout Voet6Guy Eelen7Mieke Dewerchin8Stephen W. G. Tait9Bart Ghesquière10Martin D. Bootman11Geert Bultynck12KU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IKU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IKU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IKU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IKU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IKU Leuven, Laboratory for Biomolecular Modelling and Design, Department of ChemistryKU Leuven, Laboratory for Biomolecular Modelling and Design, Department of ChemistryKU Leuven, Laboratory of Angiogenesis and Vascular Metabolism, Department of Oncology, Leuven Cancer Institute, Campus Gasthuisberg O&N4KU Leuven, Laboratory of Angiogenesis and Vascular Metabolism, Department of Oncology, Leuven Cancer Institute, Campus Gasthuisberg O&N4Cancer Research UK Beatson Institute, School of Cancer Sciences, University of GlasgowKU Leuven, Laboratory of Applied Mass Spectrometry, Department of Cellular and Molecular Medicine, Leuven, Belgium — VIB, Metabolomics Core Facility Leuven, Center for Cancer Biology, Leuven, BelgiumSchool of Life, Health and Chemical Sciences, Faculty of Science, Technology, Engineering and Mathematics, The Open University, Walton HallKU Leuven, Laboratory of Molecular and Cellular Signaling, Department of Cellular and Molecular Medicine, Campus Gasthuisberg O&N IAbstract Intracellular Ca2+ signals control several physiological and pathophysiological processes. The main tool to chelate intracellular Ca2+ is intracellular BAPTA (BAPTAi), usually introduced into cells as a membrane-permeant acetoxymethyl ester (BAPTA-AM). Previously, we demonstrated that BAPTAi enhanced apoptosis induced by venetoclax, a BCL-2 antagonist, in diffuse large B-cell lymphoma (DLBCL). This finding implied a novel interplay between intracellular Ca2+ signaling and anti-apoptotic BCL-2 function. Hence, we set out to identify the underlying mechanisms by which BAPTAi enhances cell death in B-cell cancers. In this study, we discovered that BAPTAi alone induced apoptosis in hematological cancer cell lines that were highly sensitive to S63845, an MCL-1 antagonist. BAPTAi provoked a rapid decline in MCL-1-protein levels by inhibiting mTORC1-driven Mcl-1 translation. These events were not a consequence of cell death, as BAX/BAK-deficient cancer cells exhibited similar downregulation of mTORC1 activity and MCL-1-protein levels. Next, we investigated how BAPTAi diminished mTORC1 activity and identified its ability to impair glycolysis by directly inhibiting 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (PFKFB3) activity, a previously unknown effect of BAPTAi. Notably, these effects were also induced by a BAPTAi analog with low affinity for Ca2+. Consequently, our findings uncover PFKFB3 inhibition as an Ca2+-independent mechanism through which BAPTAi impairs cellular metabolism and ultimately compromises the survival of MCL-1-dependent cancer cells. These findings hold two important implications. Firstly, the direct inhibition of PFKFB3 emerges as a key regulator of mTORC1 activity and a promising target in MCL-1-dependent cancers. Secondly, cellular effects caused by BAPTAi are not necessarily related to Ca2+ signaling. Our data support the need for a reassessment of the role of Ca2+ in cellular processes when findings were based on the use of BAPTAi.https://doi.org/10.1038/s41419-023-06120-4
spellingShingle Flore Sneyers
Martijn Kerkhofs
Femke Speelman-Rooms
Kirsten Welkenhuyzen
Rita La Rovere
Ahmed Shemy
Arnout Voet
Guy Eelen
Mieke Dewerchin
Stephen W. G. Tait
Bart Ghesquière
Martin D. Bootman
Geert Bultynck
Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
Cell Death and Disease
title Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
title_full Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
title_fullStr Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
title_full_unstemmed Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
title_short Intracellular BAPTA directly inhibits PFKFB3, thereby impeding mTORC1-driven Mcl-1 translation and killing MCL-1-addicted cancer cells
title_sort intracellular bapta directly inhibits pfkfb3 thereby impeding mtorc1 driven mcl 1 translation and killing mcl 1 addicted cancer cells
url https://doi.org/10.1038/s41419-023-06120-4
work_keys_str_mv AT floresneyers intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT martijnkerkhofs intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT femkespeelmanrooms intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT kirstenwelkenhuyzen intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT ritalarovere intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT ahmedshemy intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT arnoutvoet intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT guyeelen intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT miekedewerchin intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT stephenwgtait intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT bartghesquiere intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT martindbootman intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells
AT geertbultynck intracellularbaptadirectlyinhibitspfkfb3therebyimpedingmtorc1drivenmcl1translationandkillingmcl1addictedcancercells