<i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.)
NAC transcription factors are one of the largest transcription factor families in plants, and they play a key role in the growth and development of a secondary cell wall. Despite the fact that ramie is well-known for its high fiber yield, the role of NAC transcription factors in ramie secondary cell...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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MDPI AG
2023-06-01
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| Series: | Agronomy |
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| Online Access: | https://www.mdpi.com/2073-4395/13/6/1575 |
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| author | Xuehua Bai Yafen Fu Xin Wang Guangyao Chen Yanzhou Wang Tongying Liu Guang Li Siyuan Zhu |
| author_facet | Xuehua Bai Yafen Fu Xin Wang Guangyao Chen Yanzhou Wang Tongying Liu Guang Li Siyuan Zhu |
| author_sort | Xuehua Bai |
| collection | DOAJ |
| description | NAC transcription factors are one of the largest transcription factor families in plants, and they play a key role in the growth and development of a secondary cell wall. Despite the fact that ramie is well-known for its high fiber yield, the role of NAC transcription factors in ramie secondary cell wall synthesis and fiber development remains unknown. In this study, based on our previous study, we describe the characterization, physicochemical property analysis, protein structure and function prediction, subcellular localization, and functional validation of <i>Bnt05G007257</i>, which encodes an NAC transcription factor from ramie, in transgenic A. thaliana. Our findings show that the open reading frame of <i>Bnt05G007257</i> was 1035 bp long and encodes for a protein comprising 344 amino acids, having a relative molecular mass of 39.0945 kDa and a theoretical isoelectric point of 6.55. The secondary structure of the encoded protein mainly consisted of random coiling, with a typical conserved structural domain of NAC. The phylogenetic tree revealed that <i>Bnt05G007257</i> is a homolog of the NAC transcription factor <i>SND2</i>, which regulates secondary wall biosynthesis in A. thaliana. Subcellular localization showed that <i>Bnt05G007257</i> was tentatively predicted to be localized in the cytoplasm. Furthermore, in stem sections, the secondary wall fiber cells’ thickness <i>in Bnt05G007257</i> transgenic plants was 31.50% thicker than that in wild-type plants, and the radial width was significantly increased by approximately 21.75%. This indicates that the NAC family homolog <i>Bnt05G007257</i> may have the potential function of promoting fiber cell development and secondary cell wall synthesis, providing a theoretical basis for the selection of high-fiber-yielding ramie varieties in the future. |
| first_indexed | 2024-03-11T02:51:27Z |
| format | Article |
| id | doaj.art-1667b048edca48d9810262943d28e0a6 |
| institution | Directory Open Access Journal |
| issn | 2073-4395 |
| language | English |
| last_indexed | 2024-03-11T02:51:27Z |
| publishDate | 2023-06-01 |
| publisher | MDPI AG |
| record_format | Article |
| series | Agronomy |
| spelling | doaj.art-1667b048edca48d9810262943d28e0a62023-11-18T08:55:08ZengMDPI AGAgronomy2073-43952023-06-01136157510.3390/agronomy13061575<i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.)Xuehua Bai0Yafen Fu1Xin Wang2Guangyao Chen3Yanzhou Wang4Tongying Liu5Guang Li6Siyuan Zhu7Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaYuan LongPing High-Tech Agriculture Co., Ltd., Changsha 410125, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, ChinaNAC transcription factors are one of the largest transcription factor families in plants, and they play a key role in the growth and development of a secondary cell wall. Despite the fact that ramie is well-known for its high fiber yield, the role of NAC transcription factors in ramie secondary cell wall synthesis and fiber development remains unknown. In this study, based on our previous study, we describe the characterization, physicochemical property analysis, protein structure and function prediction, subcellular localization, and functional validation of <i>Bnt05G007257</i>, which encodes an NAC transcription factor from ramie, in transgenic A. thaliana. Our findings show that the open reading frame of <i>Bnt05G007257</i> was 1035 bp long and encodes for a protein comprising 344 amino acids, having a relative molecular mass of 39.0945 kDa and a theoretical isoelectric point of 6.55. The secondary structure of the encoded protein mainly consisted of random coiling, with a typical conserved structural domain of NAC. The phylogenetic tree revealed that <i>Bnt05G007257</i> is a homolog of the NAC transcription factor <i>SND2</i>, which regulates secondary wall biosynthesis in A. thaliana. Subcellular localization showed that <i>Bnt05G007257</i> was tentatively predicted to be localized in the cytoplasm. Furthermore, in stem sections, the secondary wall fiber cells’ thickness <i>in Bnt05G007257</i> transgenic plants was 31.50% thicker than that in wild-type plants, and the radial width was significantly increased by approximately 21.75%. This indicates that the NAC family homolog <i>Bnt05G007257</i> may have the potential function of promoting fiber cell development and secondary cell wall synthesis, providing a theoretical basis for the selection of high-fiber-yielding ramie varieties in the future.https://www.mdpi.com/2073-4395/13/6/1575ramiefiber cellssecondary cell wallNAC transcription factorfunctional validation |
| spellingShingle | Xuehua Bai Yafen Fu Xin Wang Guangyao Chen Yanzhou Wang Tongying Liu Guang Li Siyuan Zhu <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) Agronomy ramie fiber cells secondary cell wall NAC transcription factor functional validation |
| title | <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) |
| title_full | <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) |
| title_fullStr | <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) |
| title_full_unstemmed | <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) |
| title_short | <i>Bnt05G007257</i>, a Novel NAC Transcription Factor, Predicts Developmental and Synthesis Capabilities of Fiber Cells in Ramie (<i>Boehmeria</i> nivea L.) |
| title_sort | i bnt05g007257 i a novel nac transcription factor predicts developmental and synthesis capabilities of fiber cells in ramie i boehmeria i nivea l |
| topic | ramie fiber cells secondary cell wall NAC transcription factor functional validation |
| url | https://www.mdpi.com/2073-4395/13/6/1575 |
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