SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation.
FASTA and FASTQ are basic and ubiquitous formats for storing nucleotide and protein sequences. Common manipulations of FASTA/Q file include converting, searching, filtering, deduplication, splitting, shuffling, and sampling. Existing tools only implement some of these manipulations, and not particul...
Main Authors: | Wei Shen, Shuai Le, Yan Li, Fuquan Hu |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2016-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC5051824?pdf=render |
Similar Items
-
Fasta files
by: Tang, C
Published: (2017) -
FASTAFS: file system virtualisation of random access compressed FASTA files
by: Youri Hoogstrate, et al.
Published: (2021-11-01) -
Fasta2Structure: a user-friendly tool for converting multiple aligned FASTA files to STRUCTURE format
by: Adam Bessa-Silva
Published: (2024-02-01) -
Identification of high-efficiency 3′GG gRNA motifs in indexed FASTA files with ngg2
by: Elisha D. Roberson
Published: (2015-11-01) -
1:1 FASTA update: Using the power of E-values in FASTA to detect potential allergen cross-reactivity
by: Ping Song, et al.
Published: (2015-01-01)