The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)

Macrophthalmus japonicus is located in the Macrophthalmidae family, but genetic research about the whole mitochondrial genome in Macrophthalmidae family doesn’t exist. Here, we report the first complete mitochondrial genome from M. japonicus, which is composed of 16,170 base pair (bp) containing 13...

Full description

Bibliographic Details
Main Authors: Yeong-Jun Park, Chang Eon Park, Byung Kwon Jung, Min-Kyu Park, Jerald Conrad Ibal, Sang-Jun Kim, Seok Hyun Lee, Hyun Sook Ko, Jae-Ho Shin
Format: Article
Language:English
Published: Taylor & Francis Group 2019-01-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
Online Access:http://dx.doi.org/10.1080/23802359.2018.1501300
_version_ 1827774189709295616
author Yeong-Jun Park
Chang Eon Park
Byung Kwon Jung
Min-Kyu Park
Jerald Conrad Ibal
Sang-Jun Kim
Seok Hyun Lee
Hyun Sook Ko
Jae-Ho Shin
author_facet Yeong-Jun Park
Chang Eon Park
Byung Kwon Jung
Min-Kyu Park
Jerald Conrad Ibal
Sang-Jun Kim
Seok Hyun Lee
Hyun Sook Ko
Jae-Ho Shin
author_sort Yeong-Jun Park
collection DOAJ
description Macrophthalmus japonicus is located in the Macrophthalmidae family, but genetic research about the whole mitochondrial genome in Macrophthalmidae family doesn’t exist. Here, we report the first complete mitochondrial genome from M. japonicus, which is composed of 16,170 base pair (bp) containing 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs, and A + T rich region. The overall nucleotide composition of M. japonicus was G + C: 33.6%, A + T: 66.4% with a strong AT bias. The phylogenetic relationship using whole mitochondrial genome showed that M. japonicus was closest with Eriocheir japonica although their respective families are different.
first_indexed 2024-03-11T13:34:05Z
format Article
id doaj.art-172375b88ede4706b02daacc7d80cba5
institution Directory Open Access Journal
issn 2380-2359
language English
last_indexed 2024-03-11T13:34:05Z
publishDate 2019-01-01
publisher Taylor & Francis Group
record_format Article
series Mitochondrial DNA. Part B. Resources
spelling doaj.art-172375b88ede4706b02daacc7d80cba52023-11-02T15:57:25ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014125926010.1080/23802359.2018.15013001501300The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)Yeong-Jun Park0Chang Eon Park1Byung Kwon Jung2Min-Kyu Park3Jerald Conrad Ibal4Sang-Jun Kim5Seok Hyun Lee6Hyun Sook Ko7Jae-Ho Shin8Kyungpook National UniversityKyungpook National UniversityKyungpook National UniversityKyungpook National UniversityKyungpook National UniversityRepublic of Korea Naval AcademySilla UniversitySilla UniversityKyungpook National UniversityMacrophthalmus japonicus is located in the Macrophthalmidae family, but genetic research about the whole mitochondrial genome in Macrophthalmidae family doesn’t exist. Here, we report the first complete mitochondrial genome from M. japonicus, which is composed of 16,170 base pair (bp) containing 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs, and A + T rich region. The overall nucleotide composition of M. japonicus was G + C: 33.6%, A + T: 66.4% with a strong AT bias. The phylogenetic relationship using whole mitochondrial genome showed that M. japonicus was closest with Eriocheir japonica although their respective families are different.http://dx.doi.org/10.1080/23802359.2018.1501300macrophthalmus japonicusmud crabmitochondrial genome
spellingShingle Yeong-Jun Park
Chang Eon Park
Byung Kwon Jung
Min-Kyu Park
Jerald Conrad Ibal
Sang-Jun Kim
Seok Hyun Lee
Hyun Sook Ko
Jae-Ho Shin
The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
Mitochondrial DNA. Part B. Resources
macrophthalmus japonicus
mud crab
mitochondrial genome
title The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
title_full The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
title_fullStr The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
title_full_unstemmed The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
title_short The first complete mitochondrial genome sequence of the mud crab Macrophthalmus japonicus (arthropoda, decapoda, macrophthalmidae)
title_sort first complete mitochondrial genome sequence of the mud crab macrophthalmus japonicus arthropoda decapoda macrophthalmidae
topic macrophthalmus japonicus
mud crab
mitochondrial genome
url http://dx.doi.org/10.1080/23802359.2018.1501300
work_keys_str_mv AT yeongjunpark thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT changeonpark thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT byungkwonjung thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT minkyupark thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT jeraldconradibal thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT sangjunkim thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT seokhyunlee thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT hyunsookko thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT jaehoshin thefirstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT yeongjunpark firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT changeonpark firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT byungkwonjung firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT minkyupark firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT jeraldconradibal firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT sangjunkim firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT seokhyunlee firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT hyunsookko firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae
AT jaehoshin firstcompletemitochondrialgenomesequenceofthemudcrabmacrophthalmusjaponicusarthropodadecapodamacrophthalmidae