3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS

The 3D organization of an eukaryotic genome plays an important role in nuclear gene expression. Until recently, studies of this organization were limited by light microscopy and electron microscopy methods. The development of chromosome conformation capture (3С) methods allowed studying genome-wide...

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Main Authors: N. R. Battulin, V. S. Fishman, Yu. L. Orlov, A. G. Menzorov, D. A. Afonnikov, O. L. Serov
Format: Article
Language:English
Published: Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders 2014-12-01
Series:Вавиловский журнал генетики и селекции
Subjects:
Online Access:https://vavilov.elpub.ru/jour/article/view/85
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author N. R. Battulin
V. S. Fishman
Yu. L. Orlov
A. G. Menzorov
D. A. Afonnikov
O. L. Serov
author_facet N. R. Battulin
V. S. Fishman
Yu. L. Orlov
A. G. Menzorov
D. A. Afonnikov
O. L. Serov
author_sort N. R. Battulin
collection DOAJ
description The 3D organization of an eukaryotic genome plays an important role in nuclear gene expression. Until recently, studies of this organization were limited by light microscopy and electron microscopy methods. The development of chromosome conformation capture (3С) methods allowed studying genome-wide chromosomal contacts by using only molecular methods. Nowadays, numerous 3C-based methods have been developed to reconstruct the 3D organization of eukaryotic genomes.
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publishDate 2014-12-01
publisher Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders
record_format Article
series Вавиловский журнал генетики и селекции
spelling doaj.art-175e7a583d084090892d9aabe16407652024-04-11T15:30:52ZengSiberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and BreedersВавиловский журнал генетики и селекции2500-32592014-12-01164/2872878693C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSISN. R. Battulin0V. S. Fishman1Yu. L. Orlov2A. G. Menzorov3D. A. Afonnikov4O. L. Serov5Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk State University, Novosibirsk, RussiaThe 3D organization of an eukaryotic genome plays an important role in nuclear gene expression. Until recently, studies of this organization were limited by light microscopy and electron microscopy methods. The development of chromosome conformation capture (3С) methods allowed studying genome-wide chromosomal contacts by using only molecular methods. Nowadays, numerous 3C-based methods have been developed to reconstruct the 3D organization of eukaryotic genomes.https://vavilov.elpub.ru/jour/article/view/853d genome organization, 3chi-ctopological domains
spellingShingle N. R. Battulin
V. S. Fishman
Yu. L. Orlov
A. G. Menzorov
D. A. Afonnikov
O. L. Serov
3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
Вавиловский журнал генетики и селекции
3d genome organization
, 3c
hi-c
topological domains
title 3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
title_full 3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
title_fullStr 3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
title_full_unstemmed 3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
title_short 3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS
title_sort 3c based methods for 3d genome organization analysis
topic 3d genome organization
, 3c
hi-c
topological domains
url https://vavilov.elpub.ru/jour/article/view/85
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AT vsfishman 3cbasedmethodsfor3dgenomeorganizationanalysis
AT yulorlov 3cbasedmethodsfor3dgenomeorganizationanalysis
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AT daafonnikov 3cbasedmethodsfor3dgenomeorganizationanalysis
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