Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)
Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet....
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1698364 |
| _version_ | 1797639470424522752 |
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| author | María del Pilar Zamora-Tavares Isaac Sandoval-Padilla Abigail Chávez Zendejas Jessica Pérez-Alquicira Ofelia Vargas-Ponce |
| author_facet | María del Pilar Zamora-Tavares Isaac Sandoval-Padilla Abigail Chávez Zendejas Jessica Pérez-Alquicira Ofelia Vargas-Ponce |
| author_sort | María del Pilar Zamora-Tavares |
| collection | DOAJ |
| description | Physalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed. |
| first_indexed | 2024-03-11T13:18:14Z |
| format | Article |
| id | doaj.art-18742b9c077748fb86e051d066be116e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:14Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-18742b9c077748fb86e051d066be116e2023-11-03T11:00:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015116216310.1080/23802359.2019.16983641698364Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae)María del Pilar Zamora-Tavares0Isaac Sandoval-Padilla1Abigail Chávez Zendejas2Jessica Pérez-Alquicira3Ofelia Vargas-Ponce4Departmento Botánica y Zoología, Instituto de Botánica, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de GuadalajaraMaestría en Biosistemática y Manejo de Recursos Naturales y Agrícolas, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de GuadalajaraDepartmento Botánica y Zoología, Instituto de Botánica, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de GuadalajaraLaboratorio Nacional de Identificación y Caracterización Vegetal (LaniVeg), Cátedras CONACyT, Universidad de GuadalajaraDepartmento Botánica y Zoología, Instituto de Botánica, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de GuadalajaraPhysalis chenopodifolia is a perennial wild tomatillo with traditional use in central Mexico because of its edible fruits. Due to their agronomic potential and nutraceutical properties, this species is a resource that can be a candidate to plant breeding programs to be included in the Mexican diet. Here, we report the complete chloroplast genome of P. chenopodifolia. Its full size is 156,888 bp, includes a large single-copy (LSC) region of 87,117 bp, a small single-copy (SSC) region of 18,451 bp, and two invert repeat (IR) regions of 25,660 bp each. The plastome contains 113 genes, 79 protein-coding genes, 4 rRNA genes and 30 tRNA genes. The phylogenetic hypothesis supports P. chenopodifolia as a member of Physalis genus. Although relationships within the genus have moderated bootstrap support, the utility of the complete plastome sequence to solve infrageneric phylogenetic relationships is confirmed.http://dx.doi.org/10.1080/23802359.2019.1698364husk tomatoplastomephylogenytomatillossolanaceae |
| spellingShingle | María del Pilar Zamora-Tavares Isaac Sandoval-Padilla Abigail Chávez Zendejas Jessica Pérez-Alquicira Ofelia Vargas-Ponce Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) Mitochondrial DNA. Part B. Resources husk tomato plastome phylogeny tomatillos solanaceae |
| title | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
| title_full | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
| title_fullStr | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
| title_full_unstemmed | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
| title_short | Complete chloroplast genome of Physalis chenopodifolia Lam. (Solanaceae) |
| title_sort | complete chloroplast genome of physalis chenopodifolia lam solanaceae |
| topic | husk tomato plastome phylogeny tomatillos solanaceae |
| url | http://dx.doi.org/10.1080/23802359.2019.1698364 |
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