Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis

The use of deoxyribonucleic acid (DNA) hybridization to detect disease-related gene expression is a valuable diagnostic tool. An ion-sensitive field-effect transistor (ISFET) with a graphene layer has been utilized for detecting DNA hybridization. Silicene is a two-dimensional silicon allotrope with...

Full description

Bibliographic Details
Main Authors: Md. Sazzadur Rahman, Rokaia Laizu Naima, Khatuna Jannatun Shetu, Md. Mahabub Hossain, M. Shamim Kaiser, A. S. M. Sanwar Hosen, Md. Abdul Latif Sarker, Kelvin J. A. Ooi
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Biosensors
Subjects:
Online Access:https://www.mdpi.com/2079-6374/11/6/178
_version_ 1797531705005834240
author Md. Sazzadur Rahman
Rokaia Laizu Naima
Khatuna Jannatun Shetu
Md. Mahabub Hossain
M. Shamim Kaiser
A. S. M. Sanwar Hosen
Md. Abdul Latif Sarker
Kelvin J. A. Ooi
author_facet Md. Sazzadur Rahman
Rokaia Laizu Naima
Khatuna Jannatun Shetu
Md. Mahabub Hossain
M. Shamim Kaiser
A. S. M. Sanwar Hosen
Md. Abdul Latif Sarker
Kelvin J. A. Ooi
author_sort Md. Sazzadur Rahman
collection DOAJ
description The use of deoxyribonucleic acid (DNA) hybridization to detect disease-related gene expression is a valuable diagnostic tool. An ion-sensitive field-effect transistor (ISFET) with a graphene layer has been utilized for detecting DNA hybridization. Silicene is a two-dimensional silicon allotrope with structural properties similar to graphene. Thus, it has recently experienced intensive scientific research interest due to its unique electrical, mechanical, and sensing characteristics. In this paper, we proposed an ISFET structure with silicene and electrolyte layers for the label-free detection of DNA hybridization. When DNA hybridization occurs, it changes the ion concentration in the surface layer of the silicene and the pH level of the electrolyte solution. The process also changes the quantum capacitance of the silicene layer and the electrical properties of the ISFET device. The quantum capacitance and the corresponding resonant frequency readout of the silicene and graphene are compared. The performance evaluation found that the changes in quantum capacitance, resonant frequency, and tuning ratio indicate that the sensitivity of silicene is much more effective than graphene.
first_indexed 2024-03-10T10:48:29Z
format Article
id doaj.art-1a852a3efa15460990c181766451ab11
institution Directory Open Access Journal
issn 2079-6374
language English
last_indexed 2024-03-10T10:48:29Z
publishDate 2021-06-01
publisher MDPI AG
record_format Article
series Biosensors
spelling doaj.art-1a852a3efa15460990c181766451ab112023-11-21T22:23:33ZengMDPI AGBiosensors2079-63742021-06-0111617810.3390/bios11060178Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation AnalysisMd. Sazzadur Rahman0Rokaia Laizu Naima1Khatuna Jannatun Shetu2Md. Mahabub Hossain3M. Shamim Kaiser4A. S. M. Sanwar Hosen5Md. Abdul Latif Sarker6Kelvin J. A. Ooi7Institute of Information Technology, Jahangirnagar University, Savar Dhaka-1342, BangladeshDepartment of Electronics and Communication Engineering, Hajee Mohammad Danesh Science & Technology University, Basherhat N508, BangladeshDepartment of Electronics and Communication Engineering, Hajee Mohammad Danesh Science & Technology University, Basherhat N508, BangladeshDepartment of Electronics and Communication Engineering, Hajee Mohammad Danesh Science & Technology University, Basherhat N508, BangladeshInstitute of Information Technology, Jahangirnagar University, Savar Dhaka-1342, BangladeshDivision of Computer Science and Engineering, Jeonbuk National University, Jeonju 54896, KoreaDepartment of Electronic Engineering, Hanyang University, Seoul 04763, KoreaDepartment of Physics, Xiamen University Malaysia, Sepang 43900, MalaysiaThe use of deoxyribonucleic acid (DNA) hybridization to detect disease-related gene expression is a valuable diagnostic tool. An ion-sensitive field-effect transistor (ISFET) with a graphene layer has been utilized for detecting DNA hybridization. Silicene is a two-dimensional silicon allotrope with structural properties similar to graphene. Thus, it has recently experienced intensive scientific research interest due to its unique electrical, mechanical, and sensing characteristics. In this paper, we proposed an ISFET structure with silicene and electrolyte layers for the label-free detection of DNA hybridization. When DNA hybridization occurs, it changes the ion concentration in the surface layer of the silicene and the pH level of the electrolyte solution. The process also changes the quantum capacitance of the silicene layer and the electrical properties of the ISFET device. The quantum capacitance and the corresponding resonant frequency readout of the silicene and graphene are compared. The performance evaluation found that the changes in quantum capacitance, resonant frequency, and tuning ratio indicate that the sensitivity of silicene is much more effective than graphene.https://www.mdpi.com/2079-6374/11/6/178biosensorpH detectionquantum capacitanceresonant frequencyISFETs
spellingShingle Md. Sazzadur Rahman
Rokaia Laizu Naima
Khatuna Jannatun Shetu
Md. Mahabub Hossain
M. Shamim Kaiser
A. S. M. Sanwar Hosen
Md. Abdul Latif Sarker
Kelvin J. A. Ooi
Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
Biosensors
biosensor
pH detection
quantum capacitance
resonant frequency
ISFETs
title Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
title_full Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
title_fullStr Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
title_full_unstemmed Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
title_short Silicene Quantum Capacitance Dependent Frequency Readout to a Label-Free Detection of DNA Hybridization— A Simulation Analysis
title_sort silicene quantum capacitance dependent frequency readout to a label free detection of dna hybridization a simulation analysis
topic biosensor
pH detection
quantum capacitance
resonant frequency
ISFETs
url https://www.mdpi.com/2079-6374/11/6/178
work_keys_str_mv AT mdsazzadurrahman silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT rokaialaizunaima silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT khatunajannatunshetu silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT mdmahabubhossain silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT mshamimkaiser silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT asmsanwarhosen silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT mdabdullatifsarker silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis
AT kelvinjaooi silicenequantumcapacitancedependentfrequencyreadouttoalabelfreedetectionofdnahybridizationasimulationanalysis