The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae)
Thamnocalamus unispiculatus T.P.Yi & J.Y.Shi 2007 is an important bamboo species with significant ecological and economic value. This study presents the complete chloroplast genome sequence of T. unispiculatus. The sequence was 139,726 bp in length and exhibited a typical quadripartite structure...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-06-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2088308 |
| _version_ | 1797638554934837248 |
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| author | Weihua Wang Shiyu Lv Li Liu Yuanyan Meng Xiaolong Zhang Xiaying Ye |
| author_facet | Weihua Wang Shiyu Lv Li Liu Yuanyan Meng Xiaolong Zhang Xiaying Ye |
| author_sort | Weihua Wang |
| collection | DOAJ |
| description | Thamnocalamus unispiculatus T.P.Yi & J.Y.Shi 2007 is an important bamboo species with significant ecological and economic value. This study presents the complete chloroplast genome sequence of T. unispiculatus. The sequence was 139,726 bp in length and exhibited a typical quadripartite structure, containing four regions: large single copy regions (LSC, 83,283 bp), small single copy regions (SSC, 12,851 bp) and a pair of inverted repeats (IRs, 21,726 bp). A total of 130 genes were annotated, including 86 protein-coding genes, 36 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis indicated that T. unispiculatus and T. spathiflorus are sister species, supporting the conclusion that Thamnocalamus is a monophyletic group. The chloroplast genome of T. unispiculatus promotes the protection and exploration of biodiversity, phylogenetic relationships, and genetic research in Bambusoideae. |
| first_indexed | 2024-03-11T13:05:15Z |
| format | Article |
| id | doaj.art-1c9104a3d026462ea0eaeb7b1f87c784 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:15Z |
| publishDate | 2022-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-1c9104a3d026462ea0eaeb7b1f87c7842023-11-03T14:36:04ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-06-01761168117010.1080/23802359.2022.20883082088308The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae)Weihua Wang0Shiyu Lv1Li Liu2Yuanyan Meng3Xiaolong Zhang4Xiaying Ye5Agronomy and Life Science Department, Zhaotong UniversityGermplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of SciencesAgronomy and Life Science Department, Zhaotong UniversityAgronomy and Life Science Department, Zhaotong UniversityAgronomy and Life Science Department, Zhaotong UniversityAgronomy and Life Science Department, Zhaotong UniversityThamnocalamus unispiculatus T.P.Yi & J.Y.Shi 2007 is an important bamboo species with significant ecological and economic value. This study presents the complete chloroplast genome sequence of T. unispiculatus. The sequence was 139,726 bp in length and exhibited a typical quadripartite structure, containing four regions: large single copy regions (LSC, 83,283 bp), small single copy regions (SSC, 12,851 bp) and a pair of inverted repeats (IRs, 21,726 bp). A total of 130 genes were annotated, including 86 protein-coding genes, 36 transfer RNA genes, and eight ribosomal RNA genes. Phylogenetic analysis indicated that T. unispiculatus and T. spathiflorus are sister species, supporting the conclusion that Thamnocalamus is a monophyletic group. The chloroplast genome of T. unispiculatus promotes the protection and exploration of biodiversity, phylogenetic relationships, and genetic research in Bambusoideae.http://dx.doi.org/10.1080/23802359.2022.2088308arundinarieaebambusoideaechloroplast genomephylogeny, thamnocalamus unispiculatus |
| spellingShingle | Weihua Wang Shiyu Lv Li Liu Yuanyan Meng Xiaolong Zhang Xiaying Ye The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) Mitochondrial DNA. Part B. Resources arundinarieae bambusoideae chloroplast genome phylogeny, thamnocalamus unispiculatus |
| title | The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) |
| title_full | The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) |
| title_fullStr | The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) |
| title_full_unstemmed | The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) |
| title_short | The complete chloroplast genome and phylogenetic position of Thamnocalamus unispiculatus (Poaceae: Bambusoideae: Arundinarieae) |
| title_sort | complete chloroplast genome and phylogenetic position of thamnocalamus unispiculatus poaceae bambusoideae arundinarieae |
| topic | arundinarieae bambusoideae chloroplast genome phylogeny, thamnocalamus unispiculatus |
| url | http://dx.doi.org/10.1080/23802359.2022.2088308 |
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