Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem
We report a complete chloroplast genome sequence of Malus sieversii. The CP genome was 160,223 bp in length with a typical quadripartite structure. Length of large single-copy (LSC) was 88,334 bp, whereas small single-copy (SSC) was 19,179 bp in length. A pair of inverted repeats (IR) were 26,355 bp...
| Main Authors: | , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-04-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1741460 |
| _version_ | 1797639269357977600 |
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| author | Young-Ho Ha Bagila Maisupova Kyung Choi Hyun-Jun Kim Daniyar Dosmanvetov Bulkair Mambetov Ainur Utebekova Dong-Kap Kim Kae Sun Chang Aleksey Kim Soo-Rang Lee Seung Hwan Oh |
| author_facet | Young-Ho Ha Bagila Maisupova Kyung Choi Hyun-Jun Kim Daniyar Dosmanvetov Bulkair Mambetov Ainur Utebekova Dong-Kap Kim Kae Sun Chang Aleksey Kim Soo-Rang Lee Seung Hwan Oh |
| author_sort | Young-Ho Ha |
| collection | DOAJ |
| description | We report a complete chloroplast genome sequence of Malus sieversii. The CP genome was 160,223 bp in length with a typical quadripartite structure. Length of large single-copy (LSC) was 88,334 bp, whereas small single-copy (SSC) was 19,179 bp in length. A pair of inverted repeats (IR) were 26,355 bp. In total, 128 genes were found including 83 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis on concatenated data set retrieved from 78 protein-coding genes revealed that M. sieversii was closely related with both M. ×domestica and M. sylvestris. |
| first_indexed | 2024-03-11T13:15:21Z |
| format | Article |
| id | doaj.art-1e3206a2d77f45dfac5bdc5d9c90b9c2 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:15:21Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-1e3206a2d77f45dfac5bdc5d9c90b9c22023-11-03T13:50:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521504150510.1080/23802359.2020.17414601741460Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. RoemYoung-Ho Ha0Bagila Maisupova1Kyung Choi2Hyun-Jun Kim3Daniyar Dosmanvetov4Bulkair Mambetov5Ainur Utebekova6Dong-Kap Kim7Kae Sun Chang8Aleksey Kim9Soo-Rang Lee10Seung Hwan Oh11Korea National ArboretumKazakh Research Institute of Forestry and AgroforestryKorea National ArboretumNational Institute of Forest ScienceKazakh Research Institute of Forestry and AgroforestryForest, Land Resources and Phytosanitary, Kazakh National Agrarian UniversityForest, Land Resources and Phytosanitary, Kazakh National Agrarian UniversityKorea National ArboretumKorea National ArboretumKorea National ArboretumKorea National ArboretumKorea National ArboretumWe report a complete chloroplast genome sequence of Malus sieversii. The CP genome was 160,223 bp in length with a typical quadripartite structure. Length of large single-copy (LSC) was 88,334 bp, whereas small single-copy (SSC) was 19,179 bp in length. A pair of inverted repeats (IR) were 26,355 bp. In total, 128 genes were found including 83 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis on concatenated data set retrieved from 78 protein-coding genes revealed that M. sieversii was closely related with both M. ×domestica and M. sylvestris.http://dx.doi.org/10.1080/23802359.2020.1741460chloroplast genomemalus sieversiimalus ×domesticaprogenitor specieswild apple tree |
| spellingShingle | Young-Ho Ha Bagila Maisupova Kyung Choi Hyun-Jun Kim Daniyar Dosmanvetov Bulkair Mambetov Ainur Utebekova Dong-Kap Kim Kae Sun Chang Aleksey Kim Soo-Rang Lee Seung Hwan Oh Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem Mitochondrial DNA. Part B. Resources chloroplast genome malus sieversii malus ×domestica progenitor species wild apple tree |
| title | Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem |
| title_full | Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem |
| title_fullStr | Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem |
| title_full_unstemmed | Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem |
| title_short | Report on a complete chloroplast genome sequence of wild apple tree, Malus sieversii (Lebed.) M. Roem |
| title_sort | report on a complete chloroplast genome sequence of wild apple tree malus sieversii lebed m roem |
| topic | chloroplast genome malus sieversii malus ×domestica progenitor species wild apple tree |
| url | http://dx.doi.org/10.1080/23802359.2020.1741460 |
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