Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis
The chloroplast (cp) genome sequence of Persea americana Mill. has been characterized from Illumina pair-end sequencing. The complete cp genome was 152,732 bp in length, containing a large single copy region (LSC) of 84,632 bp and a small single copy region (SSC) of 18,346 bp, which were separated b...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1617073 |
| _version_ | 1827773451048321024 |
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| author | Jin Liu Li-Dan Gong Lin Qi Cheng Zheng Ying-Feng Niu Chao Shi |
| author_facet | Jin Liu Li-Dan Gong Lin Qi Cheng Zheng Ying-Feng Niu Chao Shi |
| author_sort | Jin Liu |
| collection | DOAJ |
| description | The chloroplast (cp) genome sequence of Persea americana Mill. has been characterized from Illumina pair-end sequencing. The complete cp genome was 152,732 bp in length, containing a large single copy region (LSC) of 84,632 bp and a small single copy region (SSC) of 18,346 bp, which were separated by a pair of 24,877 bp inverted repeat regions (IRs). The genome contained 126 genes, including 86 protein coding genes, 32 tRNA genes, and eight rRNA genes. Further, phylogenetic analysis of 10 representative sequences within the order Ebenales suggests that Persea americana Mill. is closely related to the species in family Sapotaceae. |
| first_indexed | 2024-03-11T13:22:09Z |
| format | Article |
| id | doaj.art-1e7a4da2445543279f888741ebb8e407 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:09Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-1e7a4da2445543279f888741ebb8e4072023-11-03T10:06:46ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01412033203410.1080/23802359.2019.16170731617073Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysisJin Liu0Li-Dan Gong1Lin Qi2Cheng Zheng3Ying-Feng Niu4Chao Shi5Yunnan Institute of Tropical CropsYunnan Institute of Tropical CropsQingdao University of Science and TechnologyYunnan Institute of Tropical CropsYunnan Institute of Tropical CropsYunnan Institute of Tropical CropsThe chloroplast (cp) genome sequence of Persea americana Mill. has been characterized from Illumina pair-end sequencing. The complete cp genome was 152,732 bp in length, containing a large single copy region (LSC) of 84,632 bp and a small single copy region (SSC) of 18,346 bp, which were separated by a pair of 24,877 bp inverted repeat regions (IRs). The genome contained 126 genes, including 86 protein coding genes, 32 tRNA genes, and eight rRNA genes. Further, phylogenetic analysis of 10 representative sequences within the order Ebenales suggests that Persea americana Mill. is closely related to the species in family Sapotaceae.http://dx.doi.org/10.1080/23802359.2019.1617073plastid genomepersea americanaebenales |
| spellingShingle | Jin Liu Li-Dan Gong Lin Qi Cheng Zheng Ying-Feng Niu Chao Shi Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis Mitochondrial DNA. Part B. Resources plastid genome persea americana ebenales |
| title | Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis |
| title_full | Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis |
| title_fullStr | Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis |
| title_full_unstemmed | Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis |
| title_short | Complete plastid genome of Persea americana Mill. (Ebenales) and phylogenetic analysis |
| title_sort | complete plastid genome of persea americana mill ebenales and phylogenetic analysis |
| topic | plastid genome persea americana ebenales |
| url | http://dx.doi.org/10.1080/23802359.2019.1617073 |
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