Recent advances in the plant epitranscriptome

Abstract Chemical modifications of RNAs, known as the epitranscriptome, are emerging as widespread regulatory mechanisms underlying gene regulation. The field of epitranscriptomics advances recently due to improved transcriptome-wide sequencing strategies for mapping RNA modifications and intensive...

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Bibliographic Details
Main Authors: Lisha Shen, Jinqi Ma, Ping Li, Yujin Wu, Hao Yu
Format: Article
Language:English
Published: BMC 2023-03-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-023-02872-6
Description
Summary:Abstract Chemical modifications of RNAs, known as the epitranscriptome, are emerging as widespread regulatory mechanisms underlying gene regulation. The field of epitranscriptomics advances recently due to improved transcriptome-wide sequencing strategies for mapping RNA modifications and intensive characterization of writers, erasers, and readers that deposit, remove, and recognize RNA modifications, respectively. Herein, we review recent advances in characterizing plant epitranscriptome and its regulatory mechanisms in post-transcriptional gene regulation and diverse physiological processes, with main emphasis on N 6-methyladenosine (m6A) and 5-methylcytosine (m5C). We also discuss the potential and challenges for utilization of epitranscriptome editing in crop improvement.
ISSN:1474-760X