Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae)
The two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-...
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| Format: | Article |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1835578 |
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| author | Min-Sub Kim Beom-Soon Choi Erick Ochieng Ogello Hee-Jin Kim Atsushi Hagiwara Jae-Seong Lee |
| author_facet | Min-Sub Kim Beom-Soon Choi Erick Ochieng Ogello Hee-Jin Kim Atsushi Hagiwara Jae-Seong Lee |
| author_sort | Min-Sub Kim |
| collection | DOAJ |
| description | The two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-coding genes (PCGs) of complete mitochondrial genomes of B. angularis was identical to those shown in other marine rotifers and the freshwater rotifer Brachionus rubens, but was different from the freshwater rotifer Brachionus calyciflorus. Of 12 PCGs, one gene (ND5) had incomplete stop codon. Furthermore, the start codon for CO1, ND4L, ND5, and CO2 was GTG, while the start codon for ND3 and other PCGs was ATA and ATG, respectively. The base composition of 12 PCGs in B. angularis mitogenome showed 20.4% for A, 47.3% for T, 17.5% for C, and 14.8% for G, respectively. The mitochondrial genome A + T base composition (67.7%) of 12 PCGs was higher than G + C (32.3%), while the complete mitochondrial genome A + T base composition (66.3%) was higher than G + C (33.7%). |
| first_indexed | 2024-03-11T13:11:21Z |
| format | Article |
| id | doaj.art-20d5b0ac163a42c590e3034b2234e222 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:21Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-20d5b0ac163a42c590e3034b2234e2222023-11-03T14:08:16ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533736373710.1080/23802359.2020.18355781835578Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae)Min-Sub Kim0Beom-Soon Choi1Erick Ochieng Ogello2Hee-Jin Kim3Atsushi Hagiwara4Jae-Seong Lee5Department of Biological Sciences, College of Science, Sungkyunkwan UniversityPhyzen Genomics InstituteDepartment of Fisheries & Natural Resources, Maseno UniversityInstitute of Integrated Science and Technology, Nagasaki UniversityInstitute of Integrated Science and Technology, Nagasaki UniversityDepartment of Biological Sciences, College of Science, Sungkyunkwan UniversityThe two complete mitochondrial genomes were sequenced from the freshwater monogonont rotifer Brachionus angularis. The mitochondrial genome sequences were 10,764 bp (mitochondrial DNA I) and 12,238 bp (mitochondrial DNA II) in size, respectively. The gene structure and its orientation of 12 protein-coding genes (PCGs) of complete mitochondrial genomes of B. angularis was identical to those shown in other marine rotifers and the freshwater rotifer Brachionus rubens, but was different from the freshwater rotifer Brachionus calyciflorus. Of 12 PCGs, one gene (ND5) had incomplete stop codon. Furthermore, the start codon for CO1, ND4L, ND5, and CO2 was GTG, while the start codon for ND3 and other PCGs was ATA and ATG, respectively. The base composition of 12 PCGs in B. angularis mitogenome showed 20.4% for A, 47.3% for T, 17.5% for C, and 14.8% for G, respectively. The mitochondrial genome A + T base composition (67.7%) of 12 PCGs was higher than G + C (32.3%), while the complete mitochondrial genome A + T base composition (66.3%) was higher than G + C (33.7%).http://dx.doi.org/10.1080/23802359.2020.1835578monogonont rotifercomplete mitochondrial genomebrachionus angulariskenyan strain |
| spellingShingle | Min-Sub Kim Beom-Soon Choi Erick Ochieng Ogello Hee-Jin Kim Atsushi Hagiwara Jae-Seong Lee Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) Mitochondrial DNA. Part B. Resources monogonont rotifer complete mitochondrial genome brachionus angularis kenyan strain |
| title | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
| title_full | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
| title_fullStr | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
| title_full_unstemmed | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
| title_short | Complete mitochondrial genome of the freshwater monogonont rotifer Brachionus angularis (Rotifera, Brachionidae) |
| title_sort | complete mitochondrial genome of the freshwater monogonont rotifer brachionus angularis rotifera brachionidae |
| topic | monogonont rotifer complete mitochondrial genome brachionus angularis kenyan strain |
| url | http://dx.doi.org/10.1080/23802359.2020.1835578 |
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