Genexpi: a toolset for identifying regulons and validating gene regulatory networks using time-course expression data
Abstract Background Identifying regulons of sigma factors is a vital subtask of gene network inference. Integrating multiple sources of data is essential for correct identification of regulons and complete gene regulatory networks. Time series of expression data measured with microarrays or RNA-seq...
Main Authors: | Martin Modrák, Jiří Vohradský |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2018-04-01
|
Series: | BMC Bioinformatics |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12859-018-2138-x |
Similar Items
-
Few regulatory metabolites coordinate expression of central metabolic genes in Escherichia coli
by: Karl Kochanowski, et al.
Published: (2017-01-01) -
EXPLORING INTER-REGULATORY GENE NETWORK DERIVED CANDIDATE GENES IMPARTING RESISTANCE IN MYCOBACTERIUM TUBERCULOSIS
by: M.A. Naeem, et al.
Published: (2023-05-01) -
Matrix Proteins and Proteinases Network in Human Cardiovascular Diseases Explored By Cytoscape
by: Robert Chen, et al.
Published: (2016-06-01) -
From petals to healing: consolidated network pharmacology and molecular docking investigations of the mechanisms underpinning Rhododendron arboreum flower’s anti-NAFLD effects
by: Nitish Singh Jangwan, et al.
Published: (2024-05-01) -
CyEnGNet—App: A new Cytoscape app for the reconstruction of large co-expression networks using an ensemble approach
by: Dulcenombre M. Saz-Navarro, et al.
Published: (2024-02-01)