Molecular characterization of soybean cultivars by microsatellite markers with universal tail sequence

The objective of this work was to standardize a semiautomated method for genotyping soybean, based on universal tail sequence primers (UTSP), and to compare it with the conventional genotyping method that uses electrophoresis in polyacrylamide gels. Thirty soybean cultivars were genotypically charac...

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Bibliographic Details
Main Authors: Carlos Alexandre Gomes Ribeiro, Janaína Paula Marques Tanure, Talles Eduardo Ferreira Maciel, Everaldo Gonçalves de Barros
Format: Article
Language:English
Published: Embrapa Informação Tecnológica 2013-03-01
Series:Pesquisa Agropecuária Brasileira
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Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-204X2013000300005&lng=en&tlng=en
Description
Summary:The objective of this work was to standardize a semiautomated method for genotyping soybean, based on universal tail sequence primers (UTSP), and to compare it with the conventional genotyping method that uses electrophoresis in polyacrylamide gels. Thirty soybean cultivars were genotypically characterized by both methods, using 13 microsatellite loci. For the UTSP method, the number of alleles (NA) was 50 (2-7 per marker) and the polymorphic information content (PIC) ranged from 0.40 to 0.74. For the conventional method, the NA was 38 (2-5 per marker) and the PIC varied from 0.39 to 0.67. The genetic dissimilarity matrices obtained by the two methods were highly correlated with each other (0.8026), and the formed groups were coherent with the phenotypic data used for varietal registration. The 13 markers allowed the distinction of all analyzed cultivars. The low cost of the UTSP method, associated with its high accuracy, makes it ideal for the characterization of soybean cultivars and for the determination of genetic purity.
ISSN:1678-3921