The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae)
The first complete chloroplast (cp) genome of Indofevillea khasiana was reported in this study. The I. khasiana cp genome was 159,238 bp in size, with two inverted repeat (IR) regions of 26,275 bp separated by a large single copy (LSC) region of 88,538 bp and a small single copy (SSC) region of 18,1...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1711824 |
| _version_ | 1827773105585520640 |
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| author | Li-Zhen Ling Shu-Dong Zhang |
| author_facet | Li-Zhen Ling Shu-Dong Zhang |
| author_sort | Li-Zhen Ling |
| collection | DOAJ |
| description | The first complete chloroplast (cp) genome of Indofevillea khasiana was reported in this study. The I. khasiana cp genome was 159,238 bp in size, with two inverted repeat (IR) regions of 26,275 bp separated by a large single copy (LSC) region of 88,538 bp and a small single copy (SSC) region of 18,150 bp. The cp genome of this species contained 113 genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content was 36.9%. Phylogenetic analysis based on the cp genome sequences suggests that I. khasiana is sister to the rest species of subfam. Cucurbitoideae. |
| first_indexed | 2024-03-11T13:17:18Z |
| format | Article |
| id | doaj.art-2405e7b010be40219bddc6c17c590146 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:18Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2405e7b010be40219bddc6c17c5901462023-11-03T11:00:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015166967010.1080/23802359.2020.17118241711824The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae)Li-Zhen Ling0Shu-Dong Zhang1School of Biological Sciences and Technology, Liupanshui Normal UniversitySchool of Biological Sciences and Technology, Liupanshui Normal UniversityThe first complete chloroplast (cp) genome of Indofevillea khasiana was reported in this study. The I. khasiana cp genome was 159,238 bp in size, with two inverted repeat (IR) regions of 26,275 bp separated by a large single copy (LSC) region of 88,538 bp and a small single copy (SSC) region of 18,150 bp. The cp genome of this species contained 113 genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content was 36.9%. Phylogenetic analysis based on the cp genome sequences suggests that I. khasiana is sister to the rest species of subfam. Cucurbitoideae.http://dx.doi.org/10.1080/23802359.2020.1711824chloroplast genomecucurbitaceaeindofevillea khasianaphylogenetic analysis |
| spellingShingle | Li-Zhen Ling Shu-Dong Zhang The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) Mitochondrial DNA. Part B. Resources chloroplast genome cucurbitaceae indofevillea khasiana phylogenetic analysis |
| title | The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) |
| title_full | The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) |
| title_fullStr | The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) |
| title_full_unstemmed | The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) |
| title_short | The complete chloroplast genome and phylogenetic analysis of Indofevillea khasiana (Cucurbitaceae) |
| title_sort | complete chloroplast genome and phylogenetic analysis of indofevillea khasiana cucurbitaceae |
| topic | chloroplast genome cucurbitaceae indofevillea khasiana phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1711824 |
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