TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms

TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms

Abstract Background The advances in high-throughput sequencing technologies are allowing more and more de novo assembling of transcriptomes from many new organisms. Some degree of automation and evaluation is required to warrant reproducibility, repetitivity and the selection of the best possible tr...

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Bibliographic Details
Main Authors: Pedro Seoane, Marina Espigares, Rosario Carmona, Álvaro Polonio, Julia Quintana, Enrico Cretazzo, Josefina Bota, Alejandro Pérez-García, Juan de Dios Alché, Luis Gómez, M. Gonzalo Claros
Format: Article
Language:English
Published: BMC 2018-11-01
Series:BMC Bioinformatics
Subjects:
Transcriptome
Assembling
Workflow
pipeline
PCA
Non-model organism
Online Access:http://link.springer.com/article/10.1186/s12859-018-2384-y

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