Host Genetic Risk Factors Associated with COVID-19 Susceptibility and Severity in Vietnamese

Since the emergence and rapid transmission of SARS-CoV-2, numerous scientific reports have searched for the association of host genetic variants with COVID-19, but the data are mostly acquired from Europe. In the current work, we explored the link between host genes (SARS-CoV-2 entry and immune syst...

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Main Authors: Vu Phuong Nhung, Nguyen Dang Ton, Tran Thi Bich Ngoc, Ma Thi Huyen Thuong, Nguyen Thi Thanh Hai, Kim Thi Phuong Oanh, Le Thi Thu Hien, Pham Ngoc Thach, Nong Van Hai, Nguyen Hai Ha
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Genes
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Online Access:https://www.mdpi.com/2073-4425/13/10/1884
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Summary:Since the emergence and rapid transmission of SARS-CoV-2, numerous scientific reports have searched for the association of host genetic variants with COVID-19, but the data are mostly acquired from Europe. In the current work, we explored the link between host genes (SARS-CoV-2 entry and immune system related to COVID-19 sensitivity/severity) and ABO blood types with COVID-19 from whole-exome data of 200 COVID-19 patients and 100 controls in Vietnam. The O blood type was found to be a protective factor that weakens the worst outcomes of infected individuals. For SARS-CoV-2 susceptibility, rs2229207 (TC genotype, allele C) and rs17860118 (allele T) of <i>IFNAR2</i> increased the risk of infection, but rs139940581 (CT genotype, allele T) of <i>SLC6A20</i> reduced virus sensitivity. For COVID-19 progress, the frequencies of rs4622692 (TG genotype) and rs1048610 (TC genotype) of <i>ADAM17</i> were significantly higher in the moderate group than in the severe/fatal group. The variant rs12329760 (AA genotype) of <i>TMPRSS2</i> was significantly associated with asymptomatic/mild symptoms. Additionally, rs2304255 (CT genotype, allele T) of <i>TYK2</i> and rs2277735 (AG genotype) of <i>DPP9</i> were associated with severe/fatal outcomes. Studies on different populations will give better insights into the pathogenesis, which is ethnic-dependent, and thus decipher the genetic factor’s contribution to mechanisms that predispose people to being more vulnerable to COVID-19.
ISSN:2073-4425