Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma

Abstract Glioblastoma (GBM) is an aggressive primary CNS malignancy and clinical outcomes have remained stagnant despite introduction of new treatments. Understanding the tumor microenvironment (TME) in which tumor associated macrophages (TAMs) interact with T cells has been of great interest. Altho...

Full description

Bibliographic Details
Main Authors: Sai Batchu, Khalid A. Hanafy, Navid Redjal, Saniya S. Godil, Ajith J. Thomas
Format: Article
Language:English
Published: Nature Portfolio 2023-11-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-023-48116-2
_version_ 1797415307202002944
author Sai Batchu
Khalid A. Hanafy
Navid Redjal
Saniya S. Godil
Ajith J. Thomas
author_facet Sai Batchu
Khalid A. Hanafy
Navid Redjal
Saniya S. Godil
Ajith J. Thomas
author_sort Sai Batchu
collection DOAJ
description Abstract Glioblastoma (GBM) is an aggressive primary CNS malignancy and clinical outcomes have remained stagnant despite introduction of new treatments. Understanding the tumor microenvironment (TME) in which tumor associated macrophages (TAMs) interact with T cells has been of great interest. Although previous studies examining TAMs in GBM have shown that certain TAMs are associated with specific clinical and/or pathologic features, these studies used an outdated M1/M2 paradigm of macrophage polarization and failed to include the continuum of TAM states in GBM. Perhaps most significantly, the interactions of TAMs with T cells have yet to be fully explored. Our study uses single-cell RNA sequencing data from adult IDH-wildtype GBM, with the primary aim of deciphering the cellular interactions of the 7 TAM subtypes with T cells in the GBM TME. Furthermore, the interactions discovered herein are compared to IDH-mutant astrocytoma, allowing for focus on the cellular ecosystem unique to GBM. The resulting ligand-receptor interactions, signaling sources, and global communication patterns discovered provide a framework for future studies to explore methods of leveraging the immune system for treating GBM.
first_indexed 2024-03-09T05:45:50Z
format Article
id doaj.art-246f7ce4c2774c8bb711f45a658c5916
institution Directory Open Access Journal
issn 2045-2322
language English
last_indexed 2024-03-09T05:45:50Z
publishDate 2023-11-01
publisher Nature Portfolio
record_format Article
series Scientific Reports
spelling doaj.art-246f7ce4c2774c8bb711f45a658c59162023-12-03T12:20:37ZengNature PortfolioScientific Reports2045-23222023-11-0113111410.1038/s41598-023-48116-2Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastomaSai Batchu0Khalid A. Hanafy1Navid Redjal2Saniya S. Godil3Ajith J. Thomas4Cooper Medical School of Rowan UniversityCooper Medical School of Rowan UniversityCooper Medical School of Rowan UniversityCooper Medical School of Rowan UniversityCooper Medical School of Rowan UniversityAbstract Glioblastoma (GBM) is an aggressive primary CNS malignancy and clinical outcomes have remained stagnant despite introduction of new treatments. Understanding the tumor microenvironment (TME) in which tumor associated macrophages (TAMs) interact with T cells has been of great interest. Although previous studies examining TAMs in GBM have shown that certain TAMs are associated with specific clinical and/or pathologic features, these studies used an outdated M1/M2 paradigm of macrophage polarization and failed to include the continuum of TAM states in GBM. Perhaps most significantly, the interactions of TAMs with T cells have yet to be fully explored. Our study uses single-cell RNA sequencing data from adult IDH-wildtype GBM, with the primary aim of deciphering the cellular interactions of the 7 TAM subtypes with T cells in the GBM TME. Furthermore, the interactions discovered herein are compared to IDH-mutant astrocytoma, allowing for focus on the cellular ecosystem unique to GBM. The resulting ligand-receptor interactions, signaling sources, and global communication patterns discovered provide a framework for future studies to explore methods of leveraging the immune system for treating GBM.https://doi.org/10.1038/s41598-023-48116-2
spellingShingle Sai Batchu
Khalid A. Hanafy
Navid Redjal
Saniya S. Godil
Ajith J. Thomas
Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
Scientific Reports
title Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
title_full Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
title_fullStr Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
title_full_unstemmed Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
title_short Single-cell analysis reveals diversity of tumor-associated macrophages and their interactions with T lymphocytes in glioblastoma
title_sort single cell analysis reveals diversity of tumor associated macrophages and their interactions with t lymphocytes in glioblastoma
url https://doi.org/10.1038/s41598-023-48116-2
work_keys_str_mv AT saibatchu singlecellanalysisrevealsdiversityoftumorassociatedmacrophagesandtheirinteractionswithtlymphocytesinglioblastoma
AT khalidahanafy singlecellanalysisrevealsdiversityoftumorassociatedmacrophagesandtheirinteractionswithtlymphocytesinglioblastoma
AT navidredjal singlecellanalysisrevealsdiversityoftumorassociatedmacrophagesandtheirinteractionswithtlymphocytesinglioblastoma
AT saniyasgodil singlecellanalysisrevealsdiversityoftumorassociatedmacrophagesandtheirinteractionswithtlymphocytesinglioblastoma
AT ajithjthomas singlecellanalysisrevealsdiversityoftumorassociatedmacrophagesandtheirinteractionswithtlymphocytesinglioblastoma