The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
Hylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1573125 |
| _version_ | 1797640526165442560 |
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| author | Yonghua Zhang Joongku Lee Xuelian Liu Zhongshuai Sun |
| author_facet | Yonghua Zhang Joongku Lee Xuelian Liu Zhongshuai Sun |
| author_sort | Yonghua Zhang |
| collection | DOAJ |
| description | Hylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single copy region (SSC, 18,378 bp) separated by a pair of inverted repeats (IRs, 26,734 bp). The cp genome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis indicated that H. japonica is close related with Coreanomecon hylomeconoides. |
| first_indexed | 2024-03-11T13:32:09Z |
| format | Article |
| id | doaj.art-2496146e69784eb891cfec8400f7aad5 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:32:09Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2496146e69784eb891cfec8400f7aad52023-11-02T16:07:26ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422349235010.1080/23802359.2019.15731251573125The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within PapaveraceaeYonghua Zhang0Joongku Lee1Xuelian Liu2Zhongshuai Sun3Wenzhou UniversityChungnam National UniversityTonghua Normal UniversityTaizhou UniversityHylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single copy region (SSC, 18,378 bp) separated by a pair of inverted repeats (IRs, 26,734 bp). The cp genome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis indicated that H. japonica is close related with Coreanomecon hylomeconoides.http://dx.doi.org/10.1080/23802359.2019.1573125coreanomecon hylomeconoidesspring ephemeral plantplastomephylogenomics |
| spellingShingle | Yonghua Zhang Joongku Lee Xuelian Liu Zhongshuai Sun The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae Mitochondrial DNA. Part B. Resources coreanomecon hylomeconoides spring ephemeral plant plastome phylogenomics |
| title | The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae |
| title_full | The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae |
| title_fullStr | The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae |
| title_full_unstemmed | The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae |
| title_short | The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae |
| title_sort | first complete chloroplast genome of hylomecon japonica and its phylogenetic position within papaveraceae |
| topic | coreanomecon hylomeconoides spring ephemeral plant plastome phylogenomics |
| url | http://dx.doi.org/10.1080/23802359.2019.1573125 |
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