Complete mitochondrial genome of Equus caballus (Datong horse)
Datong horse processes a muscular physique with high tolerance to extensive management and adapts well to high altitude conditions in Qinghai, China. In this study, the whole mitochondrial genome sequence of E. caballus determined using next-generation sequencing data was 16,654 bp in length, consis...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1591217 |
| _version_ | 1827773452873891840 |
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| author | Xian Guo Jie Pei Pengjia Bao Yuqing Zhou Xiaoyun Wu Chunnian Liang Xuezhi Ding Ping Yan |
| author_facet | Xian Guo Jie Pei Pengjia Bao Yuqing Zhou Xiaoyun Wu Chunnian Liang Xuezhi Ding Ping Yan |
| author_sort | Xian Guo |
| collection | DOAJ |
| description | Datong horse processes a muscular physique with high tolerance to extensive management and adapts well to high altitude conditions in Qinghai, China. In this study, the whole mitochondrial genome sequence of E. caballus determined using next-generation sequencing data was 16,654 bp in length, consisting of 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and a non-coding control region. Notably, there was one tandem repeat with 21 ‘CACCTGTG’ located in the control region. The base composition of the genome was A (32.3%), C (28.6%), G (13.3%), and T (25.8%), with an A + T content of 58.1%. Molecular phylogeny demonstrated that E. caballus was more closely related to a breed from central Asia and processed distinct relationships with some Chinese breeds. This work characterized the mitogenome of E. caballus (Datong horse breed) and present significant genetic information for this valuable specimen. |
| first_indexed | 2024-03-11T13:23:16Z |
| format | Article |
| id | doaj.art-24f50477e7b34b10aed9792f52ef5bb3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:23:16Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-24f50477e7b34b10aed9792f52ef5bb32023-11-03T10:06:43ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411223122410.1080/23802359.2019.15912171591217Complete mitochondrial genome of Equus caballus (Datong horse)Xian Guo0Jie Pei1Pengjia Bao2Yuqing Zhou3Xiaoyun Wu4Chunnian Liang5Xuezhi Ding6Ping Yan7Chinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesInstitute of Animal Husbandry and Veterinary Medicine of Haibei Tibetan Autonomous PrefectureChinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesChinese Academy of Agricultural SciencesDatong horse processes a muscular physique with high tolerance to extensive management and adapts well to high altitude conditions in Qinghai, China. In this study, the whole mitochondrial genome sequence of E. caballus determined using next-generation sequencing data was 16,654 bp in length, consisting of 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and a non-coding control region. Notably, there was one tandem repeat with 21 ‘CACCTGTG’ located in the control region. The base composition of the genome was A (32.3%), C (28.6%), G (13.3%), and T (25.8%), with an A + T content of 58.1%. Molecular phylogeny demonstrated that E. caballus was more closely related to a breed from central Asia and processed distinct relationships with some Chinese breeds. This work characterized the mitogenome of E. caballus (Datong horse breed) and present significant genetic information for this valuable specimen.http://dx.doi.org/10.1080/23802359.2019.1591217datong horsemitochondrial genomeillumina sequencing |
| spellingShingle | Xian Guo Jie Pei Pengjia Bao Yuqing Zhou Xiaoyun Wu Chunnian Liang Xuezhi Ding Ping Yan Complete mitochondrial genome of Equus caballus (Datong horse) Mitochondrial DNA. Part B. Resources datong horse mitochondrial genome illumina sequencing |
| title | Complete mitochondrial genome of Equus caballus (Datong horse) |
| title_full | Complete mitochondrial genome of Equus caballus (Datong horse) |
| title_fullStr | Complete mitochondrial genome of Equus caballus (Datong horse) |
| title_full_unstemmed | Complete mitochondrial genome of Equus caballus (Datong horse) |
| title_short | Complete mitochondrial genome of Equus caballus (Datong horse) |
| title_sort | complete mitochondrial genome of equus caballus datong horse |
| topic | datong horse mitochondrial genome illumina sequencing |
| url | http://dx.doi.org/10.1080/23802359.2019.1591217 |
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