Robust and scalable barcoding for massively parallel long-read sequencing

Robust and scalable barcoding for massively parallel long-read sequencing

Abstract Nucleic-acid barcoding is an enabling technique for many applications, but its use remains limited in emerging long-read sequencing technologies with intrinsically low raw accuracy. Here, we apply so-called NS-watermark barcodes, whose error correction capability was previously validated in...

書誌詳細
主要な著者:	Joaquín Ezpeleta, Ignacio Garcia Labari, Gabriela Vanina Villanova, Pilar Bulacio, Sofía Lavista-Llanos, Victoria Posner, Flavia Krsticevic, Silvia Arranz, Elizabeth Tapia
フォーマット:	論文
言語:	English
出版事項:	Nature Portfolio 2022-05-01
シリーズ:	Scientific Reports
オンライン･アクセス:	https://doi.org/10.1038/s41598-022-11656-0

類似資料

DNA Barcoding through Quaternary LDPC Codes.
著者:: Elizabeth Tapia, 等
出版事項: (2015-01-01)

Scalable transcriptome preparation for massive parallel sequencing.
著者:: Henrik Stranneheim, 等
出版事項: (2011-01-01)

Tandem Duplication Events in the Expansion of the Small Heat Shock Protein Gene Family in Solanum lycopersicum (cv. Heinz 1706)
著者:: Flavia J. Krsticevic, 等
出版事項: (2016-10-01)

A Factor Graph Approach to Automated GO Annotation.
著者:: Flavio E Spetale, 等
出版事項: (2016-01-01)

First DNA Barcode Reference Library for the Identification of South American Freshwater Fish from the Lower Paraná River.
著者:: Juan Díaz, 等
出版事項: (2016-01-01)

Droplet barcoding for massively parallel single-molecule deep sequencing
著者:: Freeman Lan, 等
出版事項: (2016-06-01)

Prototyping a scalable massively-parallel supercomputer architecture with FPGAs
著者:: Phillips, Michael P. (Michael Patrick), 1977-
出版事項: (2014)

Generation of barcoded plasmid libraries for massively parallel analysis of chromatin position effects
著者:: M. O. Lebedev, 等
出版事項: (2019-03-01)

Using individual barcodes to increase quantification power of massively parallel reporter assays
著者:: Pia Keukeleire, 等
出版事項: (2025-02-01)

Consistency of the Tools That Predict the Impact of Single Nucleotide Variants (SNVs) on Gene Functionality: The <i>BRCA1</i> Gene
著者:: Javier Murillo, 等
出版事項: (2020-03-01)

top-ii-vol: Massively Parallel Scalable Meshing for Seismic Risk Assessment of Nuclear Sites
著者:: Badri M.A., 等
出版事項: (2024-01-01)

Scalable Strategies for Computing with Massive Data
著者:: Michael Kane, 等
出版事項: (2013-11-01)

A longitudinal two-year survey of the prevalence of trypanosomes in domestic cattle in Ghana by massively parallel sequencing of barcoded amplicons.
著者:: Jennifer Afua Ofori, 等
出版事項: (2022-04-01)

No functional contribution of the gustatory receptor, Gr64b, co-expressed in olfactory sensory neurons of Drosophila melanogaster
著者:: Venkatesh Pal Mahadevan, 等
出版事項: (2022-09-01)

Scalable development of multiplexed microparticle technologies for optical single-cell barcoding
著者:: Dannenberg, Paul H.
出版事項: (2022)

Environmental barcoding reveals massive dinoflagellate diversity in marine environments.
著者:: Rowena F Stern, 等
出版事項: (2010-11-01)

A scalable architecture for ordered parallelism
著者:: Emer, Joel, 等
出版事項: (2017)

Hierarchical scalable storage architecture for massive electronic bill
著者:: Fenghua LI, 等
出版事項: (2019-05-01)

Hierarchical scalable storage architecture for massive electronic bill
著者:: Fenghua LI, 等
出版事項: (2019-05-01)

Scalable Cell-Free Massive MIMO with Multiple CPUs
著者:: Feiyang Li, 等
出版事項: (2022-06-01)

Analysis of scalable channel estimation in FDD massive MIMO
著者:: Xing Zhang, 等
出版事項: (2023-03-01)

Massively parallel combinatorial microbiology
著者:: Kehe, Jared Scott.
出版事項: (2020)

Massively parallelizing the RRT and the RRT*
著者:: Karaman, Sertac, 等
出版事項: (2013)

Massively parallel video networks
著者:: Carreira, J, 等
出版事項: (2018)

Development of massively parallel nanolithography
著者:: Lee, Sharon Mei Yi.
出版事項: (2013)

A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions
著者:: Ulrich Schlecht, 等
出版事項: (2017-05-01)

Massive Parallel Alignment of RNA-seq Reads in Serverless Computing
著者:: Pietro Cinaglia, 等
出版事項: (2023-05-01)

A scalable architecture for ordered irregular parallelism
著者:: Sanchez, Daniel
出版事項: (2021)

Scalable Reader-writer Locks for Parallel Systems
著者:: Hsieh, William C., 等
出版事項: (2023)

Advanced computer architecture : parallelism, scalability, programmability /
著者:: 174480 Hwang, Kai
出版事項: (2000)

Scalable parallel computing : technology, architecture, programming /
著者:: 174480 Hwang, Kai, 等
出版事項: (1998)

Research on the scalability of parallel community detection algorithms
著者:: Qiang LIU, 等
出版事項: (2018-04-01)

Research on the scalability of parallel community detection algorithms
著者:: Qiang LIU, 等
出版事項: (2018-04-01)

Scalable Surface-Code Decoders with Parallelization in Time
著者:: Xinyu Tan, 等
出版事項: (2023-12-01)

Functional Interaction Between Drosophila Olfactory Sensory Neurons and Their Support Cells
著者:: Sinisa Prelic, 等
出版事項: (2022-01-01)

Scalable Cell-Free Massive MIMO With Indoor/Outdoor Users
著者:: Felip Riera-Palou, 等
出版事項: (2025-01-01)

Performance and Architectural Tradeoffs in Scalable Cell-Free Massive MIMO
著者:: Muteen Munawar, 等
出版事項: (2024-01-01)

On Scalability of FDD-Based Cell-Free Massive MIMO Framework
著者:: Beenish Hassan, 等
出版事項: (2023-08-01)

Study of Clustering Solutions for Scalable Cell-Free Massive MIMO
著者:: Danaisy Prado-Alvarez, 等
出版事項: (2023-01-01)

TreeSwift: A massively scalable Python tree package
著者:: N. Moshiri
出版事項: (2020-01-01)