The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop
Coix lacryma-jobi is a cereal and medicinal crop belonging to the Poaceae family. This study characterized complete chloroplast genome sequence of a Korean cultivar Johyun of C. lacryma-jobi var. ma-yuen through the de novo hybrid assembly with Illumina and PacBio genomic reads. The chloroplast geno...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1507653 |
| _version_ | 1797640592991191040 |
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| author | Sang-Ho Kang Hyun Oh Lee Myung Ju Shin Nam-Hoon Kim Beom-Soon Choi Manu Kumar Asjad Ali Sang-Choon Lee Chang-Kug Kim |
| author_facet | Sang-Ho Kang Hyun Oh Lee Myung Ju Shin Nam-Hoon Kim Beom-Soon Choi Manu Kumar Asjad Ali Sang-Choon Lee Chang-Kug Kim |
| author_sort | Sang-Ho Kang |
| collection | DOAJ |
| description | Coix lacryma-jobi is a cereal and medicinal crop belonging to the Poaceae family. This study characterized complete chloroplast genome sequence of a Korean cultivar Johyun of C. lacryma-jobi var. ma-yuen through the de novo hybrid assembly with Illumina and PacBio genomic reads. The chloroplast genome is 140,863 bp long and composed of large single copy (82,827 bp), small single copy (12,522 bp), and a pair of inverted repeats (each 22,757 bp). A total of 123 genes including 87 protein-coding genes, 32 tRNA genes, and four rRNA genes were predicted in the genome. Phylogenetic analysis confirmed a close relationship of C. lacryma-jobi with species in the Panicoideae subfamily of the Poaceae family. |
| first_indexed | 2024-03-11T13:34:07Z |
| format | Article |
| id | doaj.art-25b625c826564ee1822a0ee7df0250aa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:07Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-25b625c826564ee1822a0ee7df0250aa2023-11-02T15:57:26ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013298098110.1080/23802359.2018.15076531507653The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal cropSang-Ho Kang0Hyun Oh Lee1Myung Ju Shin2Nam-Hoon Kim3Beom-Soon Choi4Manu Kumar5Asjad Ali6Sang-Choon Lee7Chang-Kug Kim8, National Institute of Agricultural Sciences, Rural Development AdministrationPhyzen CoPhyzen CoPhyzen CoPhyzen CoSejong University, Southern Cross UniversityPhyzen Co, National Institute of Agricultural Sciences, Rural Development AdministrationCoix lacryma-jobi is a cereal and medicinal crop belonging to the Poaceae family. This study characterized complete chloroplast genome sequence of a Korean cultivar Johyun of C. lacryma-jobi var. ma-yuen through the de novo hybrid assembly with Illumina and PacBio genomic reads. The chloroplast genome is 140,863 bp long and composed of large single copy (82,827 bp), small single copy (12,522 bp), and a pair of inverted repeats (each 22,757 bp). A total of 123 genes including 87 protein-coding genes, 32 tRNA genes, and four rRNA genes were predicted in the genome. Phylogenetic analysis confirmed a close relationship of C. lacryma-jobi with species in the Panicoideae subfamily of the Poaceae family.http://dx.doi.org/10.1080/23802359.2018.1507653coix lacryma-jobipoaceaechloroplast genomecereal cropmedicinal plant |
| spellingShingle | Sang-Ho Kang Hyun Oh Lee Myung Ju Shin Nam-Hoon Kim Beom-Soon Choi Manu Kumar Asjad Ali Sang-Choon Lee Chang-Kug Kim The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop Mitochondrial DNA. Part B. Resources coix lacryma-jobi poaceae chloroplast genome cereal crop medicinal plant |
| title | The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop |
| title_full | The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop |
| title_fullStr | The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop |
| title_full_unstemmed | The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop |
| title_short | The complete chloroplast genome sequence of Coix lacryma-jobi L. (Poaceae), a cereal and medicinal crop |
| title_sort | complete chloroplast genome sequence of coix lacryma jobi l poaceae a cereal and medicinal crop |
| topic | coix lacryma-jobi poaceae chloroplast genome cereal crop medicinal plant |
| url | http://dx.doi.org/10.1080/23802359.2018.1507653 |
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