Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables
Here we report the draft genome sequence of the Latilactobacillus curvatus PN39MY strain. The strain was isolated from Lithuanian traditionally (homemade) fermented cucumber. The genome consisted of 83 contigs with a total size of 1,899,018 bp, an N50 of 40562 and a GC% of 42.1. After sequence trimm...
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| Format: | Article |
| Language: | English |
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Elsevier
2023-08-01
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| Series: | Data in Brief |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S235234092300536X |
| _version_ | 1797743972371660800 |
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| author | Eric Banan-Mwine Daliri Toma Balnionytė Eglė Lastauskienė Aurelijus Burokas |
| author_facet | Eric Banan-Mwine Daliri Toma Balnionytė Eglė Lastauskienė Aurelijus Burokas |
| author_sort | Eric Banan-Mwine Daliri |
| collection | DOAJ |
| description | Here we report the draft genome sequence of the Latilactobacillus curvatus PN39MY strain. The strain was isolated from Lithuanian traditionally (homemade) fermented cucumber. The genome consisted of 83 contigs with a total size of 1,899,018 bp, an N50 of 40562 and a GC% of 42.1. After sequence trimming, 83 contigs were annotated and 1910 genes were coding sequences. The average nucleotide identity (ANI) between PN39MY and Latilactobacillus curvatus_ZJUNIT8 was 99.45% identifying the strain as Latilactobacillus curvatus. No genes related to antimicrobial resistance or virulence factors were found. The data presented here can be used in comparative genomics to identify antimicrobial resistant genes, plasmids and/or virulence factors that may be present in related Latilactobacillus species. The draft genome sequence data was deposited at NCBI under Bioproject with the accession number PRJNA941180. |
| first_indexed | 2024-03-12T15:04:07Z |
| format | Article |
| id | doaj.art-26069fca4b174739ab02950f5b4cdbe8 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-03-12T15:04:07Z |
| publishDate | 2023-08-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-26069fca4b174739ab02950f5b4cdbe82023-08-13T04:54:19ZengElsevierData in Brief2352-34092023-08-0149109436Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetablesEric Banan-Mwine Daliri0Toma Balnionytė1Eglė Lastauskienė2Aurelijus Burokas3Department of Biological Models, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, Lithuania; Corresponding authors.Department of Biological Models, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, LithuaniaDepartment of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, LithuaniaDepartment of Biological Models, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, Lithuania; Corresponding authors.Here we report the draft genome sequence of the Latilactobacillus curvatus PN39MY strain. The strain was isolated from Lithuanian traditionally (homemade) fermented cucumber. The genome consisted of 83 contigs with a total size of 1,899,018 bp, an N50 of 40562 and a GC% of 42.1. After sequence trimming, 83 contigs were annotated and 1910 genes were coding sequences. The average nucleotide identity (ANI) between PN39MY and Latilactobacillus curvatus_ZJUNIT8 was 99.45% identifying the strain as Latilactobacillus curvatus. No genes related to antimicrobial resistance or virulence factors were found. The data presented here can be used in comparative genomics to identify antimicrobial resistant genes, plasmids and/or virulence factors that may be present in related Latilactobacillus species. The draft genome sequence data was deposited at NCBI under Bioproject with the accession number PRJNA941180.http://www.sciencedirect.com/science/article/pii/S235234092300536XAntimicrobial resistanceVirulence genesAverage nucleotide identityGenome annotation |
| spellingShingle | Eric Banan-Mwine Daliri Toma Balnionytė Eglė Lastauskienė Aurelijus Burokas Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables Data in Brief Antimicrobial resistance Virulence genes Average nucleotide identity Genome annotation |
| title | Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables |
| title_full | Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables |
| title_fullStr | Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables |
| title_full_unstemmed | Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables |
| title_short | Draft genome sequence dataset of Latilactobacillus curvatus PN39MY isolated from fermented vegetables |
| title_sort | draft genome sequence dataset of latilactobacillus curvatus pn39my isolated from fermented vegetables |
| topic | Antimicrobial resistance Virulence genes Average nucleotide identity Genome annotation |
| url | http://www.sciencedirect.com/science/article/pii/S235234092300536X |
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