The chloroplast genome of silk floss tree (Ceiba speciosa)
Ceiba speciosa (Malvaceae), also called silk floss tree, is a beautiful and deciduous tree native to tropical and subtropical forests of South America. Its phylogenetic position remains unclear. In this study, the complete chloroplast genome sequence of C. speciosa was reported. Its chloroplast geno...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1677188 |
| _version_ | 1827773247069880320 |
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| author | Songyi Huang Qiaoming Zhu Guilian Huang Bingqian Han Qiujie Zhou Jinhong Dai |
| author_facet | Songyi Huang Qiaoming Zhu Guilian Huang Bingqian Han Qiujie Zhou Jinhong Dai |
| author_sort | Songyi Huang |
| collection | DOAJ |
| description | Ceiba speciosa (Malvaceae), also called silk floss tree, is a beautiful and deciduous tree native to tropical and subtropical forests of South America. Its phylogenetic position remains unclear. In this study, the complete chloroplast genome sequence of C. speciosa was reported. Its chloroplast genome size was 160,360 bp, which contains a small single copy (SSC) region of 19,947 bp and a large single copy region (LSC) of 89,393 bp, and two inverted repeats (IRs) of 25,510 bp each. In total, 129 genes were annotated for the chloroplast genome, including 86 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Phylogenetic analysis showed that C. speciosa was sister to Bombax ceiba. |
| first_indexed | 2024-03-11T13:19:18Z |
| format | Article |
| id | doaj.art-271422116d3a42bfbda1def664649c8a |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:19:18Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-271422116d3a42bfbda1def664649c8a2023-11-03T10:38:49ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423632363310.1080/23802359.2019.16771881677188The chloroplast genome of silk floss tree (Ceiba speciosa)Songyi Huang0Qiaoming Zhu1Guilian Huang2Bingqian Han3Qiujie Zhou4Jinhong Dai5The Ecological & Landscape Research Center, Guangzhou Landscaping CompanyThe General Manager Office, Guangzhou Minghui Landscape Technology Co. LtdThe Ecological & Landscape Research Center, Guangzhou Landscaping CompanySun Yat-sen UniversitySun Yat-sen UniversitySun Yat-sen UniversityCeiba speciosa (Malvaceae), also called silk floss tree, is a beautiful and deciduous tree native to tropical and subtropical forests of South America. Its phylogenetic position remains unclear. In this study, the complete chloroplast genome sequence of C. speciosa was reported. Its chloroplast genome size was 160,360 bp, which contains a small single copy (SSC) region of 19,947 bp and a large single copy region (LSC) of 89,393 bp, and two inverted repeats (IRs) of 25,510 bp each. In total, 129 genes were annotated for the chloroplast genome, including 86 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Phylogenetic analysis showed that C. speciosa was sister to Bombax ceiba.http://dx.doi.org/10.1080/23802359.2019.1677188ceiba speciosachloroplast genomemalvaceaeillumina sequencing |
| spellingShingle | Songyi Huang Qiaoming Zhu Guilian Huang Bingqian Han Qiujie Zhou Jinhong Dai The chloroplast genome of silk floss tree (Ceiba speciosa) Mitochondrial DNA. Part B. Resources ceiba speciosa chloroplast genome malvaceae illumina sequencing |
| title | The chloroplast genome of silk floss tree (Ceiba speciosa) |
| title_full | The chloroplast genome of silk floss tree (Ceiba speciosa) |
| title_fullStr | The chloroplast genome of silk floss tree (Ceiba speciosa) |
| title_full_unstemmed | The chloroplast genome of silk floss tree (Ceiba speciosa) |
| title_short | The chloroplast genome of silk floss tree (Ceiba speciosa) |
| title_sort | chloroplast genome of silk floss tree ceiba speciosa |
| topic | ceiba speciosa chloroplast genome malvaceae illumina sequencing |
| url | http://dx.doi.org/10.1080/23802359.2019.1677188 |
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