Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships
Gerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy r...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1644230 |
| _version_ | 1797639693285720064 |
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| author | Yong-Yan Zhang Fan Liu Xing-qi Wang Xiao-bao Shi Na Tian Zhong-Xiong Lai Chun-Zhen Cheng |
| author_facet | Yong-Yan Zhang Fan Liu Xing-qi Wang Xiao-bao Shi Na Tian Zhong-Xiong Lai Chun-Zhen Cheng |
| author_sort | Yong-Yan Zhang |
| collection | DOAJ |
| description | Gerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy region (83,518 bp) and a small single copy region (18,244 bp), and a pair of IR regions (25,068 bp). The chloroplast genome contains 113 unique genes, including 80 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis based on chloroplast genomes of Gerbera and other 17 plant species indicated that the relationship between Gerbera and other plant species of family Compositae is not very close and its relationship with Atractylodes lancea is the closest. |
| first_indexed | 2024-03-11T13:21:17Z |
| format | Article |
| id | doaj.art-273bf3a7bf4a4722924e117edc0c9832 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:21:17Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-273bf3a7bf4a4722924e117edc0c98322023-11-03T10:28:36ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422706270710.1080/23802359.2019.16442301644230Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationshipsYong-Yan Zhang0Fan Liu1Xing-qi Wang2Xiao-bao Shi3Na Tian4Zhong-Xiong Lai5Chun-Zhen Cheng6Fujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityFujian Agriculture and Forestry UniversityGerbera (Gerbera jamesonii Bolus) is one of the most popular ornamental flowers and one of the top five cut flowers worldwide. In this study, we presented the complete chloroplast genome of it using BGISEQ-500 sequencing. Its chloroplast genome is 151,898 bp in size, containing a large single copy region (83,518 bp) and a small single copy region (18,244 bp), and a pair of IR regions (25,068 bp). The chloroplast genome contains 113 unique genes, including 80 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis based on chloroplast genomes of Gerbera and other 17 plant species indicated that the relationship between Gerbera and other plant species of family Compositae is not very close and its relationship with Atractylodes lancea is the closest.http://dx.doi.org/10.1080/23802359.2019.1644230gerbera jamesonii boluschloroplast genomecompositaephylogenetic relationship analysis |
| spellingShingle | Yong-Yan Zhang Fan Liu Xing-qi Wang Xiao-bao Shi Na Tian Zhong-Xiong Lai Chun-Zhen Cheng Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships Mitochondrial DNA. Part B. Resources gerbera jamesonii bolus chloroplast genome compositae phylogenetic relationship analysis |
| title | Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
| title_full | Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
| title_fullStr | Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
| title_full_unstemmed | Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
| title_short | Characterization of the complete chloroplast genome of Gerbera jamesonii Bolus in China and phylogenetic relationships |
| title_sort | characterization of the complete chloroplast genome of gerbera jamesonii bolus in china and phylogenetic relationships |
| topic | gerbera jamesonii bolus chloroplast genome compositae phylogenetic relationship analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1644230 |
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