Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds

Soybean (<i>Glycine max</i> (L.) Merrill) isoflavones are among the most important secondary metabolites, with functional benefits for human health. Soybeans accumulate three aglycone forms of isoflavones: genistein, daidzein, and glycitein. Soybean landrace Kumachi-1 does not accumulate...

Full description

Bibliographic Details
Main Authors: Masaki Horitani, Risa Yamada, Kanami Taroura, Akari Maeda, Toyoaki Anai, Satoshi Watanabe
Format: Article
Language:English
Published: MDPI AG 2024-01-01
Series:Plants
Subjects:
Online Access:https://www.mdpi.com/2223-7747/13/2/156
_version_ 1797339462672318464
author Masaki Horitani
Risa Yamada
Kanami Taroura
Akari Maeda
Toyoaki Anai
Satoshi Watanabe
author_facet Masaki Horitani
Risa Yamada
Kanami Taroura
Akari Maeda
Toyoaki Anai
Satoshi Watanabe
author_sort Masaki Horitani
collection DOAJ
description Soybean (<i>Glycine max</i> (L.) Merrill) isoflavones are among the most important secondary metabolites, with functional benefits for human health. Soybeans accumulate three aglycone forms of isoflavones: genistein, daidzein, and glycitein. Soybean landrace Kumachi-1 does not accumulate malonylglycitin at all. Gene structure analysis indicated that <i>Glyma.11G108300</i> (<i>F6H4</i>) of Kumachi-1 has a 3.8-kbp insertion, resulting in a truncated flavonoid 6-hydroxylase (<i>F6H</i>) sequence compared to the wild-type sequence in Fukuyutaka. Mapping experiments using a mutant line (MUT1246) with a phenotype similar to that of Kumachi-1, with a single-nucleotide polymorphism (SNP) in <i>F6H4</i>, revealed co-segregation of this mutation and the absence of glycitein isoflavones. We also identified a mutant line (K01) that exhibited a change in the HPLC retention time of glycitein isoflavones, accumulating glycoside and malonylglycoside forms of 6-hydroxydaidzein. K01 contains an SNP that produces a premature stop codon in <i>Glyma.01G004200</i> (<i>IOMT3</i>), a novel soybean isoflavone O-methyltransferase (<i>IOMT</i>) gene. We further analyzed transgenic hairy roots of soybeans expressing <i>Glyma.11G108300</i> (<i>F6H4</i>) and <i>Glyma.01G004200</i> (<i>IOMT3</i>). Those overexpressing <i>F6H4</i> accumulated malonylglycoside forms of 6-hydroxydaidzein (M_6HD), and co-expression of <i>F6H4</i> and <i>IOMT3</i> increased the level of malonylglycitin but not of M_6HD. These results indicate that <i>F6H4</i> and <i>IOMT3</i> are responsible for glycitein biosynthesis in soybean seed hypocotyl.
first_indexed 2024-03-08T09:48:29Z
format Article
id doaj.art-2741ea557d994d8089f585d4e2693c68
institution Directory Open Access Journal
issn 2223-7747
language English
last_indexed 2024-03-08T09:48:29Z
publishDate 2024-01-01
publisher MDPI AG
record_format Article
series Plants
spelling doaj.art-2741ea557d994d8089f585d4e2693c682024-01-29T14:10:36ZengMDPI AGPlants2223-77472024-01-0113215610.3390/plants13020156Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean SeedsMasaki Horitani0Risa Yamada1Kanami Taroura2Akari Maeda3Toyoaki Anai4Satoshi Watanabe5Faculty of Agriculture, Saga University, 1 Honjo-machi, Saga 840-8502, JapanFaculty of Agriculture, Saga University, 1 Honjo-machi, Saga 840-8502, JapanFaculty of Agriculture, Saga University, 1 Honjo-machi, Saga 840-8502, JapanFaculty of Agriculture, Saga University, 1 Honjo-machi, Saga 840-8502, JapanFaculty of Agriculture, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, JapanFaculty of Agriculture, Saga University, 1 Honjo-machi, Saga 840-8502, JapanSoybean (<i>Glycine max</i> (L.) Merrill) isoflavones are among the most important secondary metabolites, with functional benefits for human health. Soybeans accumulate three aglycone forms of isoflavones: genistein, daidzein, and glycitein. Soybean landrace Kumachi-1 does not accumulate malonylglycitin at all. Gene structure analysis indicated that <i>Glyma.11G108300</i> (<i>F6H4</i>) of Kumachi-1 has a 3.8-kbp insertion, resulting in a truncated flavonoid 6-hydroxylase (<i>F6H</i>) sequence compared to the wild-type sequence in Fukuyutaka. Mapping experiments using a mutant line (MUT1246) with a phenotype similar to that of Kumachi-1, with a single-nucleotide polymorphism (SNP) in <i>F6H4</i>, revealed co-segregation of this mutation and the absence of glycitein isoflavones. We also identified a mutant line (K01) that exhibited a change in the HPLC retention time of glycitein isoflavones, accumulating glycoside and malonylglycoside forms of 6-hydroxydaidzein. K01 contains an SNP that produces a premature stop codon in <i>Glyma.01G004200</i> (<i>IOMT3</i>), a novel soybean isoflavone O-methyltransferase (<i>IOMT</i>) gene. We further analyzed transgenic hairy roots of soybeans expressing <i>Glyma.11G108300</i> (<i>F6H4</i>) and <i>Glyma.01G004200</i> (<i>IOMT3</i>). Those overexpressing <i>F6H4</i> accumulated malonylglycoside forms of 6-hydroxydaidzein (M_6HD), and co-expression of <i>F6H4</i> and <i>IOMT3</i> increased the level of malonylglycitin but not of M_6HD. These results indicate that <i>F6H4</i> and <i>IOMT3</i> are responsible for glycitein biosynthesis in soybean seed hypocotyl.https://www.mdpi.com/2223-7747/13/2/156<i>Glycine max</i>isoflavoneQTLglycitein6-hydroxydaidzeinflavonoid 6-hydroxylase
spellingShingle Masaki Horitani
Risa Yamada
Kanami Taroura
Akari Maeda
Toyoaki Anai
Satoshi Watanabe
Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
Plants
<i>Glycine max</i>
isoflavone
QTL
glycitein
6-hydroxydaidzein
flavonoid 6-hydroxylase
title Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
title_full Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
title_fullStr Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
title_full_unstemmed Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
title_short Identification of Genes Responsible for the Synthesis of Glycitein Isoflavones in Soybean Seeds
title_sort identification of genes responsible for the synthesis of glycitein isoflavones in soybean seeds
topic <i>Glycine max</i>
isoflavone
QTL
glycitein
6-hydroxydaidzein
flavonoid 6-hydroxylase
url https://www.mdpi.com/2223-7747/13/2/156
work_keys_str_mv AT masakihoritani identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds
AT risayamada identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds
AT kanamitaroura identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds
AT akarimaeda identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds
AT toyoakianai identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds
AT satoshiwatanabe identificationofgenesresponsibleforthesynthesisofglyciteinisoflavonesinsoybeanseeds