A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors

Antibiotic resistance constitutes one of the most serious threats to the global public health and urgently requires new and effective solutions. Bacteriophages are bacterial viruses increasingly recognized as being good alternatives to traditional antibiotic therapies. In this study, the efficacy of...

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Main Authors: Diana P. Pires, Andreas Dötsch, Erin M. Anderson, Youai Hao, Cezar M. Khursigara, Joseph S. Lam, Sanna Sillankorva, Joana Azeredo
Format: Article
Language:English
Published: Frontiers Media S.A. 2017-06-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/article/10.3389/fmicb.2017.01229/full
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author Diana P. Pires
Andreas Dötsch
Erin M. Anderson
Youai Hao
Cezar M. Khursigara
Joseph S. Lam
Sanna Sillankorva
Joana Azeredo
author_facet Diana P. Pires
Andreas Dötsch
Erin M. Anderson
Youai Hao
Cezar M. Khursigara
Joseph S. Lam
Sanna Sillankorva
Joana Azeredo
author_sort Diana P. Pires
collection DOAJ
description Antibiotic resistance constitutes one of the most serious threats to the global public health and urgently requires new and effective solutions. Bacteriophages are bacterial viruses increasingly recognized as being good alternatives to traditional antibiotic therapies. In this study, the efficacy of phages, targeting different cell receptors, against Pseudomonas aeruginosa PAO1 biofilm and planktonic cell cultures was evaluated over the course of 48 h. Although significant reductions in the number of viable cells were achieved for both cases, the high level of adaptability of the bacteria in response to the selective pressure caused by phage treatment resulted in the emergence of phage-resistant variants. To further investigate the genetic makeup of phage-resistant variants isolated from biofilm infection experiments, some of these bacteria were selected for phenotypic and genotypic characterization. Whole genome sequencing was performed on five phage-resistant variants and all of them carried mutations affecting the galU gene as well as one of pil genes. The sequencing analysis further revealed that three of the P. aeruginosa PAO1 variants carry large deletions (>200 kbp) in their genomes. Complementation of the galU mutants with wild-type galU in trans restored LPS expression on the bacterial cell surface of these bacterial strains and rendered the complemented strains to be sensitive to phages. This provides unequivocal evidence that inactivation of galU function was associated with resistance to the phages that uses LPS as primary receptors. Overall, this work demonstrates that P. aeruginosa biofilms can survive phage attack and develop phage-resistant variants exhibiting defective LPS production and loss of type IV pili that are well adapted to the biofilm mode of growth.
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spelling doaj.art-28b5cacd56d84d639a5b35c56661f6562022-12-21T19:45:33ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2017-06-01810.3389/fmicb.2017.01229254821A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface ReceptorsDiana P. Pires0Andreas Dötsch1Erin M. Anderson2Youai Hao3Cezar M. Khursigara4Joseph S. Lam5Sanna Sillankorva6Joana Azeredo7CEB-Centre of Biological Engineering, Universidade do MinhoBraga, PortugalInstitute of Functional Interfaces, Karlsruhe Institute of TechnologyEggenstein-Leopoldshafen, GermanyDepartment of Molecular and Cellular Biology, College of Biological Science, University of Guelph, GuelphON, CanadaDepartment of Molecular and Cellular Biology, College of Biological Science, University of Guelph, GuelphON, CanadaDepartment of Molecular and Cellular Biology, College of Biological Science, University of Guelph, GuelphON, CanadaDepartment of Molecular and Cellular Biology, College of Biological Science, University of Guelph, GuelphON, CanadaCEB-Centre of Biological Engineering, Universidade do MinhoBraga, PortugalCEB-Centre of Biological Engineering, Universidade do MinhoBraga, PortugalAntibiotic resistance constitutes one of the most serious threats to the global public health and urgently requires new and effective solutions. Bacteriophages are bacterial viruses increasingly recognized as being good alternatives to traditional antibiotic therapies. In this study, the efficacy of phages, targeting different cell receptors, against Pseudomonas aeruginosa PAO1 biofilm and planktonic cell cultures was evaluated over the course of 48 h. Although significant reductions in the number of viable cells were achieved for both cases, the high level of adaptability of the bacteria in response to the selective pressure caused by phage treatment resulted in the emergence of phage-resistant variants. To further investigate the genetic makeup of phage-resistant variants isolated from biofilm infection experiments, some of these bacteria were selected for phenotypic and genotypic characterization. Whole genome sequencing was performed on five phage-resistant variants and all of them carried mutations affecting the galU gene as well as one of pil genes. The sequencing analysis further revealed that three of the P. aeruginosa PAO1 variants carry large deletions (>200 kbp) in their genomes. Complementation of the galU mutants with wild-type galU in trans restored LPS expression on the bacterial cell surface of these bacterial strains and rendered the complemented strains to be sensitive to phages. This provides unequivocal evidence that inactivation of galU function was associated with resistance to the phages that uses LPS as primary receptors. Overall, this work demonstrates that P. aeruginosa biofilms can survive phage attack and develop phage-resistant variants exhibiting defective LPS production and loss of type IV pili that are well adapted to the biofilm mode of growth.http://journal.frontiersin.org/article/10.3389/fmicb.2017.01229/fullbiofilmsbacteriophagesP. aeruginosabacterial resistance
spellingShingle Diana P. Pires
Andreas Dötsch
Erin M. Anderson
Youai Hao
Cezar M. Khursigara
Joseph S. Lam
Sanna Sillankorva
Joana Azeredo
A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
Frontiers in Microbiology
biofilms
bacteriophages
P. aeruginosa
bacterial resistance
title A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
title_full A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
title_fullStr A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
title_full_unstemmed A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
title_short A Genotypic Analysis of Five P. aeruginosa Strains after Biofilm Infection by Phages Targeting Different Cell Surface Receptors
title_sort genotypic analysis of five p aeruginosa strains after biofilm infection by phages targeting different cell surface receptors
topic biofilms
bacteriophages
P. aeruginosa
bacterial resistance
url http://journal.frontiersin.org/article/10.3389/fmicb.2017.01229/full
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