The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice
Phaeodactylum tricornutum ICE-H is a single-cell eukaryotic alga that can grow in the extreme Antarctic environment. The complete chloroplast genome of Phaeodactylum tricornutum ICE-H was assembled with the Illumina sequencing. The chloroplast genome was 117,363 bp in size, containing a large single...
| Үндсэн зохиолчид: | , , , , , |
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| Формат: | Өгүүллэг |
| Хэл сонгох: | English |
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Taylor & Francis Group
2020-04-01
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| Цуврал: | Mitochondrial DNA. Part B. Resources |
| Нөхцлүүд: | |
| Онлайн хандалт: | http://dx.doi.org/10.1080/23802359.2020.1731340 |
| _version_ | 1827773038850998272 |
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| author | Dan Li Yingying He Liping Zhang Fanye Wang Changfeng Qu Jinlai Miao |
| author_facet | Dan Li Yingying He Liping Zhang Fanye Wang Changfeng Qu Jinlai Miao |
| author_sort | Dan Li |
| collection | DOAJ |
| description | Phaeodactylum tricornutum ICE-H is a single-cell eukaryotic alga that can grow in the extreme Antarctic environment. The complete chloroplast genome of Phaeodactylum tricornutum ICE-H was assembled with the Illumina sequencing. The chloroplast genome was 117,363 bp in size, containing a large single-copy region (LSC, 63,668 bp), a small single-copy region (SSC, 39,871 bp), and a pair of inverted repeat regions (IRs, 13,824 bp each). The overall GC content was 32.15%. A total of 168 genes were predicted including 132 protein-coding genes, 30 tRNAs, and 6 rRNAs. Phylogenetic analysis indicated that Phaeodactylum tricornutum ICE-H was closely related to Didymosphenia geminata. |
| first_indexed | 2024-03-11T13:16:20Z |
| format | Article |
| id | doaj.art-292c043f20684e76820ba5ee18937266 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:16:20Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-292c043f20684e76820ba5ee189372662023-11-03T11:00:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521182118310.1080/23802359.2020.17313401731340The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea iceDan Li0Yingying He1Liping Zhang2Fanye Wang3Changfeng Qu4Jinlai Miao5Qingdao University of Science and TechnologyFirst Institute of Oceanography, Ministry of Natural ResourceQingdao University of Science and TechnologyQingdao University of Science and TechnologyFirst Institute of Oceanography, Ministry of Natural ResourceQingdao University of Science and TechnologyPhaeodactylum tricornutum ICE-H is a single-cell eukaryotic alga that can grow in the extreme Antarctic environment. The complete chloroplast genome of Phaeodactylum tricornutum ICE-H was assembled with the Illumina sequencing. The chloroplast genome was 117,363 bp in size, containing a large single-copy region (LSC, 63,668 bp), a small single-copy region (SSC, 39,871 bp), and a pair of inverted repeat regions (IRs, 13,824 bp each). The overall GC content was 32.15%. A total of 168 genes were predicted including 132 protein-coding genes, 30 tRNAs, and 6 rRNAs. Phylogenetic analysis indicated that Phaeodactylum tricornutum ICE-H was closely related to Didymosphenia geminata.http://dx.doi.org/10.1080/23802359.2020.1731340phaeodactylum tricornutum ice-hchloroplast genomephylogenetic analysis |
| spellingShingle | Dan Li Yingying He Liping Zhang Fanye Wang Changfeng Qu Jinlai Miao The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice Mitochondrial DNA. Part B. Resources phaeodactylum tricornutum ice-h chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice |
| title_full | The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice |
| title_fullStr | The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice |
| title_full_unstemmed | The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice |
| title_short | The complete chloroplast genome of Phaeodactylum tricornutum ICE-H isolated from the Antarctic sea ice |
| title_sort | complete chloroplast genome of phaeodactylum tricornutum ice h isolated from the antarctic sea ice |
| topic | phaeodactylum tricornutum ice-h chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1731340 |
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