The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae)
The complete chloroplast genome sequence of Amentotaxus yunnanensis has been defined in this study. The genome is 138,604 bp in length and one of the large inverted repeats found till date. The overall GC content of the genome is 35.1%. The A. yunnanensis chloroplast genome contains 118 unique genes...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1637293 |
| _version_ | 1797639763618955264 |
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| author | Jun Zhang Ze-Peng Cao Shuo Li Meng-Meng Liu Xiao-Wei Huo |
| author_facet | Jun Zhang Ze-Peng Cao Shuo Li Meng-Meng Liu Xiao-Wei Huo |
| author_sort | Jun Zhang |
| collection | DOAJ |
| description | The complete chloroplast genome sequence of Amentotaxus yunnanensis has been defined in this study. The genome is 138,604 bp in length and one of the large inverted repeats found till date. The overall GC content of the genome is 35.1%. The A. yunnanensis chloroplast genome contains 118 unique genes, including 81 protein-coding genes, 31 tRNA genes, and 4 rRNA genes. Nine protein-coding genes and 6 tRNA contain a single intron, while another species (ycf3) has a couple of introns. A neighbor-joining phylogenetic analysis suggested that A. yunnanensis is closely related to A. argotaenia and A. formosana within the Taxaceae family. |
| first_indexed | 2024-03-11T13:21:17Z |
| format | Article |
| id | doaj.art-293c4f96161c4322ad903ebf42e840fa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:21:17Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-293c4f96161c4322ad903ebf42e840fa2023-11-03T10:28:35ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422477247810.1080/23802359.2019.16372931637293The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae)Jun Zhang0Ze-Peng Cao1Shuo Li2Meng-Meng Liu3Xiao-Wei Huo4Hebei UniversityHebei UniversityHebei UniversityHebei UniversityHebei UniversityThe complete chloroplast genome sequence of Amentotaxus yunnanensis has been defined in this study. The genome is 138,604 bp in length and one of the large inverted repeats found till date. The overall GC content of the genome is 35.1%. The A. yunnanensis chloroplast genome contains 118 unique genes, including 81 protein-coding genes, 31 tRNA genes, and 4 rRNA genes. Nine protein-coding genes and 6 tRNA contain a single intron, while another species (ycf3) has a couple of introns. A neighbor-joining phylogenetic analysis suggested that A. yunnanensis is closely related to A. argotaenia and A. formosana within the Taxaceae family.http://dx.doi.org/10.1080/23802359.2019.1637293amentotaxus yunnanensischloroplast genomemutationphylogenetic analysis |
| spellingShingle | Jun Zhang Ze-Peng Cao Shuo Li Meng-Meng Liu Xiao-Wei Huo The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) Mitochondrial DNA. Part B. Resources amentotaxus yunnanensis chloroplast genome mutation phylogenetic analysis |
| title | The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) |
| title_full | The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) |
| title_fullStr | The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) |
| title_short | The complete chloroplast genome sequence of Amentotaxus yunnanensis (Taxaceae) |
| title_sort | complete chloroplast genome sequence of amentotaxus yunnanensis taxaceae |
| topic | amentotaxus yunnanensis chloroplast genome mutation phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1637293 |
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