WGS-Based Prediction and Analysis of Antimicrobial Resistance in Campylobacter jejuni Isolates From Israel

WGS-Based Prediction and Analysis of Antimicrobial Resistance in Campylobacter jejuni Isolates From Israel

Rapid developments in the field of whole genome sequencing (WGS) make in silico antimicrobial resistance (AMR) a target within reach. Campylobacter jejuni is a leading cause of foodborne infections in Israel with increasing rates of resistance. We applied WGS analysis to study the prevalence and gen...

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Bibliographic Details
Main Authors: Assaf Rokney, Lea Valinsky, Katleen Vranckx, Noa Feldman, Vered Agmon, Jacob Moran-Gilad, Miriam Weinberger
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-08-01
Series:Frontiers in Cellular and Infection Microbiology
Subjects:
Campylobacter jejuni
antimicrobial resistance
antimicrobial-susceptibility testing
bioinformatics
whole-genome sequencing
Online Access:https://www.frontiersin.org/article/10.3389/fcimb.2020.00365/full

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