The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.

Azospirillum baldaniorum Sp245, a plant growth-promoting rhizobacterium, can form biofilms through a process controlled by the second messenger cyclic diguanylate monophosphate (c-di-GMP). A. baldaniorum has a variety of proteins potentially involved in controlling the turnover of c-di-GMP many of w...

Full description

Bibliographic Details
Main Authors: Víctor I Viruega-Góngora, Iris S Acatitla-Jácome, David Zamorano-Sánchez, Sandra R Reyes-Carmona, María L Xiqui-Vázquez, Beatriz Eugenia Baca, Alberto Ramírez-Mata
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0278036
_version_ 1797959118743404544
author Víctor I Viruega-Góngora
Iris S Acatitla-Jácome
David Zamorano-Sánchez
Sandra R Reyes-Carmona
María L Xiqui-Vázquez
Beatriz Eugenia Baca
Alberto Ramírez-Mata
author_facet Víctor I Viruega-Góngora
Iris S Acatitla-Jácome
David Zamorano-Sánchez
Sandra R Reyes-Carmona
María L Xiqui-Vázquez
Beatriz Eugenia Baca
Alberto Ramírez-Mata
author_sort Víctor I Viruega-Góngora
collection DOAJ
description Azospirillum baldaniorum Sp245, a plant growth-promoting rhizobacterium, can form biofilms through a process controlled by the second messenger cyclic diguanylate monophosphate (c-di-GMP). A. baldaniorum has a variety of proteins potentially involved in controlling the turnover of c-di-GMP many of which are coupled to sensory domains that could be involved in establishing a mutualistic relationship with the host. Here, we present in silico analysis and experimental characterization of the function of CdgB (AZOBR_p410089), a predicted MHYT-PAS-GGDEF-EAL multidomain protein from A. baldaniorum Sp245. When overproduced, CdgB behaves predominantly as a c-di-GMP phosphodiesterase (PDE) in A. baldaniorum Sp245. It inhibits biofilm formation and extracellular polymeric substances production and promotes swimming motility. However, a CdgB variant with a degenerate PDE domain behaves as diguanylate cyclase (DGC). This strongly suggest that CdgB is capable of dual activity. Variants with alterations in the DGC domain and the MHYT domain negatively affects extracellular polymeric substances production and induction of swimming motility. Surprisingly, we observed that overproduction of CdgB results in increased c-di-GMP accumulation in the heterologous host Escherichia coli, suggesting under certain conditions, the WT CdgB variant can behave predominantly as a DGC. Furthermore, we also demonstrated that CdgB is anchored to the cell membrane and localizes potentially to the cell poles. This localization is dependent on the presence of the MHYT domain. In summary, our results suggest that CdgB can provide versatility to signaling modules that control motile and sessile lifestyles in response to key environmental signals in A. baldaniorum.
first_indexed 2024-04-11T00:28:08Z
format Article
id doaj.art-2988b10f22be41baa33535be6b6f9547
institution Directory Open Access Journal
issn 1932-6203
language English
last_indexed 2024-04-11T00:28:08Z
publishDate 2022-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj.art-2988b10f22be41baa33535be6b6f95472023-01-08T05:31:25ZengPublic Library of Science (PLoS)PLoS ONE1932-62032022-01-011711e027803610.1371/journal.pone.0278036The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.Víctor I Viruega-GóngoraIris S Acatitla-JácomeDavid Zamorano-SánchezSandra R Reyes-CarmonaMaría L Xiqui-VázquezBeatriz Eugenia BacaAlberto Ramírez-MataAzospirillum baldaniorum Sp245, a plant growth-promoting rhizobacterium, can form biofilms through a process controlled by the second messenger cyclic diguanylate monophosphate (c-di-GMP). A. baldaniorum has a variety of proteins potentially involved in controlling the turnover of c-di-GMP many of which are coupled to sensory domains that could be involved in establishing a mutualistic relationship with the host. Here, we present in silico analysis and experimental characterization of the function of CdgB (AZOBR_p410089), a predicted MHYT-PAS-GGDEF-EAL multidomain protein from A. baldaniorum Sp245. When overproduced, CdgB behaves predominantly as a c-di-GMP phosphodiesterase (PDE) in A. baldaniorum Sp245. It inhibits biofilm formation and extracellular polymeric substances production and promotes swimming motility. However, a CdgB variant with a degenerate PDE domain behaves as diguanylate cyclase (DGC). This strongly suggest that CdgB is capable of dual activity. Variants with alterations in the DGC domain and the MHYT domain negatively affects extracellular polymeric substances production and induction of swimming motility. Surprisingly, we observed that overproduction of CdgB results in increased c-di-GMP accumulation in the heterologous host Escherichia coli, suggesting under certain conditions, the WT CdgB variant can behave predominantly as a DGC. Furthermore, we also demonstrated that CdgB is anchored to the cell membrane and localizes potentially to the cell poles. This localization is dependent on the presence of the MHYT domain. In summary, our results suggest that CdgB can provide versatility to signaling modules that control motile and sessile lifestyles in response to key environmental signals in A. baldaniorum.https://doi.org/10.1371/journal.pone.0278036
spellingShingle Víctor I Viruega-Góngora
Iris S Acatitla-Jácome
David Zamorano-Sánchez
Sandra R Reyes-Carmona
María L Xiqui-Vázquez
Beatriz Eugenia Baca
Alberto Ramírez-Mata
The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
PLoS ONE
title The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
title_full The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
title_fullStr The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
title_full_unstemmed The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
title_short The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization.
title_sort ggdef eal protein cdgb from azospirillum baldaniorum sp245 is a dual function enzyme with potential polar localization
url https://doi.org/10.1371/journal.pone.0278036
work_keys_str_mv AT victoriviruegagongora theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT irissacatitlajacome theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT davidzamoranosanchez theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT sandrarreyescarmona theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT marialxiquivazquez theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT beatrizeugeniabaca theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT albertoramirezmata theggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT victoriviruegagongora ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT irissacatitlajacome ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT davidzamoranosanchez ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT sandrarreyescarmona ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT marialxiquivazquez ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT beatrizeugeniabaca ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization
AT albertoramirezmata ggdefealproteincdgbfromazospirillumbaldaniorumsp245isadualfunctionenzymewithpotentialpolarlocalization